EnhancerDB
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  3. rs573227012[chr19:5953015]
Enhancers that have rs573227012[chr19:5953015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 5953003 5953253 vista28404
VISTA
Transcript factors that have rs573227012[chr19:5953015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5952336 5955349 ZNF274 GTRD no Bone Marrow (K562) 21843714
chr19 5952336 5955349 ZNF274 GTRD no Bone Marrow (K562) 108376060
chr19 5952423 5955648 ZNF274 GTRD no Bone Marrow (K562) 21843715
chr19 5952423 5955648 ZNF274 GTRD no Bone Marrow (K562) 108376061
chr19 5952777 5955130 ZNF274 GTRD no Bone Marrow (K562) 21843716
chr19 5952777 5955130 ZNF274 GTRD no Bone Marrow (K562) 108376062
chr19 5952846 5954419 ZNF274 GTRD no Bone Marrow (K562) 21843717
chr19 5952846 5954419 ZNF274 GTRD no Bone Marrow (K562) 108376063
chr19 5952887 5953688 ZNF274 GTRD no Blood (GM12878) 108376064
chr19 5952893 5953567 ZNF274 GTRD no Bone Marrow (K562) 21843718
chr19 5952893 5953567 ZNF274 GTRD no Bone Marrow (K562) 108376065
chr19 5952894 5953417 ZBTB33 GTRD no Brain (SK-N-SH) 21843719
chr19 5952894 5953417 ZBTB33 GTRD no Brain (SK-N-SH) 108376066
chr19 5952909 5954541 ZNF274 GTRD no Bone Marrow (K562) 21843720
chr19 5952909 5954541 ZNF274 GTRD no Bone Marrow (K562) 108376067
chr19 5952913 5953467 ZNF274 GTRD no Bone Marrow (K562) 21843721
chr19 5952913 5953467 ZNF274 GTRD no Bone Marrow (K562) 108376068
chr19 5952960 5953422 ZNF274 GTRD no Blood (GM12878) 108376069
chr19 5952962 5953467 ZNF274 GTRD no Bone Marrow (K562) 21843722
chr19 5952962 5953467 ZNF274 GTRD no Bone Marrow (K562) 108376070
chr19 5952967 5955304 ZNF274 GTRD no Bone Marrow (K562) 21843723
chr19 5952967 5955304 ZNF274 GTRD no Bone Marrow (K562) 108376071
chr19 5952971 5953456 ZNF274 GTRD no Blood (GM12878) 108376072
chr19 5952976 5953432 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21843724
chr19 5952976 5953432 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108376073
chr19 5952998 5953614 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21843725
chr19 5952998 5953614 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108376074
chr19 5953010 5953334 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21843726
chr19 5953010 5953334 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108376075
chr19 5953011 5953021 NKX2-3 JASPAR yes 70792884
chr19 5953011 5953021 NKX2-3 JASPAR yes 112247423
chr19 5953011 5953374 ZNF274 GTRD no Blood (GM12878) 108376076
chr19 5953012 5953021 NKX2-8 JASPAR yes 70792885
chr19 5953012 5953021 NKX2-8 JASPAR yes 112247424
Genes associated with rs573227012[chr19:5953015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More