EnhancerDB
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  3. vista28411[chr19:6058680-6058810]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28411[chr19:6058680-6058810]
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Tissue distribution of vista28411
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Transcription factor that possibly regulate vista28411[chr19:6058680-6058810]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6058683 6058688 GATA1 TRANSFAC yes 70793311
chr19 6058683 6058688 GATA1 TRANSFAC yes 112253068
chr19 6058695 6058716 IRF1 JASPAR yes 70793312
chr19 6058695 6058716 IRF1 JASPAR yes 112253069
chr19 6058697 6058707 TEAD1 JASPAR yes 70793313
chr19 6058697 6058707 TEAD4 JASPAR yes 70793314
chr19 6058697 6058707 TEAD1 JASPAR yes 112253070
chr19 6058697 6058707 TEAD4 JASPAR yes 112253071
chr19 6058699 6058720 IRF1 JASPAR yes 70793315
chr19 6058699 6058720 IRF1 JASPAR yes 112253072
chr19 6058701 6058706 ETS2 TRANSFAC yes 70793316
chr19 6058701 6058706 ETS2 TRANSFAC yes 112253073
chr19 6058701 6058716 PRDM1 JASPAR yes 70793317
chr19 6058701 6058716 PRDM1 JASPAR yes 112253074
chr19 6058728 6058749 IRF1 JASPAR yes 70793318
chr19 6058728 6058749 IRF1 JASPAR yes 112253075
chr19 6058730 6058745 STAT2 JASPAR yes 70793319
chr19 6058730 6058745 STAT2 JASPAR yes 112253076
chr19 6058731 6058745 SPI1 JASPAR yes 70793320
chr19 6058731 6058745 SPI1 JASPAR yes 112253077
chr19 6058735 6058750 FOXP1 JASPAR yes 70793321
chr19 6058735 6058750 FOXP1 JASPAR yes 112253078
chr19 6058736 6058747 FOXP2 JASPAR yes 70793322
chr19 6058736 6058747 FOXP2 JASPAR yes 112253079
chr19 6058757 6058772 PRDM1 JASPAR yes 70793323
chr19 6058757 6058772 PRDM1 JASPAR yes 112253080
chr19 6058760 6058771 E2F6 JASPAR yes 70793324
chr19 6058760 6058771 E2F6 JASPAR yes 112253081
SNP sites on vista28411[chr19:6058680-6058810]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6058724 rs17842397 T C no 5412176
chr19 6058744 rs79171016 T C
FOXP1 FOXP2 IRF1 SPI1 STAT2
5412177
Genes possibly regulated by vista28411[chr19:6058680-6058810]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 19473
chr19 6135258 6193112 + ACSBG2 ENSG00000130377.9 6135258 0.93 1.0 16880 23552
Expression level of Genes
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miRNAs possibly regulated by vista28411[chr19:6058680-6058810]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results