EnhancerDB
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  3. rs79171016[chr19:6058744]
Enhancers that have rs79171016[chr19:6058744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6055365 6071655 enh17885
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr19 6058680 6058810 vista28411
VISTA
Transcript factors that have rs79171016[chr19:6058744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6058728 6058749 IRF1 JASPAR yes 70793318
chr19 6058728 6058749 IRF1 JASPAR yes 112253075
chr19 6058730 6058745 STAT2 JASPAR yes 70793319
chr19 6058730 6058745 STAT2 JASPAR yes 112253076
chr19 6058731 6058745 SPI1 JASPAR yes 70793320
chr19 6058731 6058745 SPI1 JASPAR yes 112253077
chr19 6058735 6058750 FOXP1 JASPAR yes 70793321
chr19 6058735 6058750 FOXP1 JASPAR yes 112253078
chr19 6058736 6058747 FOXP2 JASPAR yes 70793322
chr19 6058736 6058747 FOXP2 JASPAR yes 112253079
Genes associated with rs79171016[chr19:6058744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More