EnhancerDB
  1. Home
  2. Enhancers
  3. vista28602[chr19:10865897-10866291]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28602[chr19:10865897-10866291]
Back to top
Tissue distribution of vista28602
Back to top
Transcription factor that possibly regulate vista28602[chr19:10865897-10866291]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10865821 10866088 CEBPB UCSC Txn Factor no Conserved 108383846
chr19 10865906 10865918 GLI2 JASPAR yes 70802982
chr19 10865906 10865918 GLI2 JASPAR yes 112436334
chr19 10865917 10865922 ETS2 TRANSFAC yes 70802983
chr19 10865917 10865922 ETS2 TRANSFAC yes 112436335
chr19 10865926 10865931 ATF1 TRANSFAC yes 70802984
chr19 10865926 10865931 ATF1 TRANSFAC yes 112436336
chr19 10865947 10865954 PEA3 TRANSFAC yes 70802985
chr19 10865947 10865954 PEA3 TRANSFAC yes 112436337
chr19 10865957 10865970 DUXA JASPAR yes 70802986
chr19 10865957 10865970 DUXA JASPAR yes 112436338
chr19 10865958 10865969 DUX4 JASPAR yes 70802987
chr19 10865958 10865969 DUX4 JASPAR yes 112436339
chr19 10865959 10865970 CEBPB JASPAR yes 70802988
chr19 10865959 10865970 CEBPB JASPAR yes 112436340
chr19 10865959 10865972 ATF4 JASPAR yes 70802989
chr19 10865959 10865972 ATF4 JASPAR yes 112436341
chr19 10865960 10865971 CEBPA JASPAR yes 70802990
chr19 10865960 10865971 CEBPA JASPAR yes 112436342
chr19 10865960 10865973 JUN JASPAR yes 70802991
chr19 10865960 10865973 JUN JASPAR yes 112436343
chr19 10865965 10865975 TFEB JASPAR yes 70802992
chr19 10865965 10865975 TFEC JASPAR yes 70802993
chr19 10865965 10865975 TFEB JASPAR yes 112436344
chr19 10865965 10865975 TFEC JASPAR yes 112436345
chr19 10865996 10866008 PKNOX1 JASPAR yes 70802994
chr19 10865996 10866008 TGIF1 JASPAR yes 70802995
chr19 10865996 10866008 TGIF2 JASPAR yes 70802996
chr19 10865996 10866008 PKNOX1 JASPAR yes 112436346
chr19 10865996 10866008 TGIF1 JASPAR yes 112436347
chr19 10865996 10866008 TGIF2 JASPAR yes 112436348
chr19 10866013 10866022 NKX2-8 JASPAR yes 70802997
chr19 10866013 10866022 NKX2-8 JASPAR yes 112436349
chr19 10866013 10866027 TCF7L2 JASPAR yes 70802998
chr19 10866013 10866027 TCF7L2 JASPAR yes 112436350
chr19 10866015 10866030 MEF2C JASPAR yes 70802999
chr19 10866015 10866030 MEF2C JASPAR yes 112436351
chr19 10866016 10866031 MEF2A JASPAR yes 70803000
chr19 10866016 10866031 MEF2A JASPAR yes 112436352
chr19 10866018 10866028 MEF2A JASPAR yes 70803001
chr19 10866018 10866028 MEF2A JASPAR yes 112436353
chr19 10866030 10866035 MYB TRANSFAC yes 70803002
chr19 10866030 10866035 MYB TRANSFAC yes 112436354
chr19 10866042 10866058 SOX4 JASPAR yes 70803003
chr19 10866042 10866058 SOX4 JASPAR yes 112436355
chr19 10866048 10866052 LFA1 TRANSFAC yes 70803004
chr19 10866048 10866052 LFA1 TRANSFAC yes 112436356
chr19 10866063 10866067 LFA1 TRANSFAC yes 70803005
chr19 10866063 10866067 LFA1 TRANSFAC yes 112436357
chr19 10866063 10866075 HES5 JASPAR yes 70803006
chr19 10866063 10866075 HES7 JASPAR yes 70803007
chr19 10866063 10866075 HES5 JASPAR yes 112436358
chr19 10866063 10866075 HES7 JASPAR yes 112436359
chr19 10866064 10866074 BHLHE40 JASPAR yes 70803008
chr19 10866064 10866074 BHLHE41 JASPAR yes 70803009
chr19 10866064 10866074 CLOCK JASPAR yes 70803010
chr19 10866064 10866074 HEY1 JASPAR yes 70803011
chr19 10866064 10866074 HEY2 JASPAR yes 70803012
chr19 10866064 10866074 MAX JASPAR yes 70803013
chr19 10866064 10866074 MLXIPL JASPAR yes 70803014
chr19 10866064 10866074 MLX JASPAR yes 70803015
chr19 10866064 10866074 MNT JASPAR yes 70803016
chr19 10866064 10866074 TFE3 JASPAR yes 70803017
chr19 10866064 10866074 TFEB JASPAR yes 70803018
chr19 10866064 10866074 TFEC JASPAR yes 70803019
chr19 10866064 10866074 BHLHE40 JASPAR yes 112436360
chr19 10866064 10866074 BHLHE41 JASPAR yes 112436361
chr19 10866064 10866074 CLOCK JASPAR yes 112436362
chr19 10866064 10866074 HEY1 JASPAR yes 112436363
chr19 10866064 10866074 HEY2 JASPAR yes 112436364
chr19 10866064 10866074 MAX JASPAR yes 112436365
chr19 10866064 10866074 MLXIPL JASPAR yes 112436366
chr19 10866064 10866074 MLX JASPAR yes 112436367
chr19 10866064 10866074 MNT JASPAR yes 112436368
chr19 10866064 10866074 TFE3 JASPAR yes 112436369
chr19 10866064 10866074 TFEB JASPAR yes 112436370
chr19 10866064 10866074 TFEC JASPAR yes 112436371
chr19 10866066 10866071 MYC TRANSFAC yes 70803020
chr19 10866066 10866071 USF1 TRANSFAC yes 70803021
chr19 10866066 10866071 USF2 TRANSFAC yes 70803022
chr19 10866066 10866071 MYC TRANSFAC yes 112436372
chr19 10866066 10866071 USF1 TRANSFAC yes 112436373
chr19 10866066 10866071 USF2 TRANSFAC yes 112436374
chr19 10866071 10866079 MEIS2 JASPAR yes 70803023
chr19 10866071 10866079 MEIS3 JASPAR yes 70803024
chr19 10866071 10866079 MEIS2 JASPAR yes 112436375
chr19 10866071 10866079 MEIS3 JASPAR yes 112436376
chr19 10866072 10866076 NFE TRANSFAC yes 70803025
chr19 10866072 10866076 NFE TRANSFAC yes 112436377
chr19 10866088 10866099 FOSL2 JASPAR yes 70803026
chr19 10866088 10866099 JUNB JASPAR yes 70803027
chr19 10866088 10866099 FOSL2 JASPAR yes 112436378
chr19 10866088 10866099 JUNB JASPAR yes 112436379
chr19 10866099 10866109 SMAD3 JASPAR yes 70803028
chr19 10866099 10866109 SMAD3 JASPAR yes 112436380
chr19 10866134 10866138 YY1 TRANSFAC yes 70803029
chr19 10866134 10866138 YY1 TRANSFAC yes 112436381
chr19 10866134 10866155 IRF1 JASPAR yes 70803030
chr19 10866134 10866155 IRF1 JASPAR yes 112436382
chr19 10866136 10866157 IRF1 JASPAR yes 70803031
chr19 10866136 10866157 IRF1 JASPAR yes 112436383
chr19 10866137 10866152 FOXP1 JASPAR yes 70803032
chr19 10866137 10866152 FOXP1 JASPAR yes 112436384
chr19 10866139 10866154 FOXP1 JASPAR yes 70803033
chr19 10866139 10866154 FOXP1 JASPAR yes 112436385
chr19 10866141 10866156 FOXP1 JASPAR yes 70803034
chr19 10866141 10866156 FOXP1 JASPAR yes 112436386
chr19 10866142 10866157 FOXP1 JASPAR yes 70803035
chr19 10866142 10866157 FOXP1 JASPAR yes 112436387
chr19 10866143 10866158 FOXP1 JASPAR yes 70803036
chr19 10866143 10866158 FOXP1 JASPAR yes 112436388
chr19 10866144 10866159 FOXP1 JASPAR yes 70803037
chr19 10866144 10866159 FOXP1 JASPAR yes 112436389
chr19 10866170 10866174 NFE TRANSFAC yes 70803038
chr19 10866170 10866174 NFE TRANSFAC yes 112436390
chr19 10866202 10866212 SREBF1 JASPAR yes 70803039
chr19 10866202 10866212 SREBF1 JASPAR yes 112436391
chr19 10866204 10866221 ESR1 JASPAR yes 70803040
chr19 10866204 10866221 ESR1 JASPAR yes 112436392
chr19 10866258 10866268 NKX2-3 JASPAR yes 70803041
chr19 10866258 10866268 NKX2-3 JASPAR yes 112436393
chr19 10866273 10866285 PKNOX1 JASPAR yes 70803042
chr19 10866273 10866285 TGIF1 JASPAR yes 70803043
chr19 10866273 10866285 TGIF2 JASPAR yes 70803044
chr19 10866273 10866285 PKNOX1 JASPAR yes 112436394
chr19 10866273 10866285 TGIF1 JASPAR yes 112436395
chr19 10866273 10866285 TGIF2 JASPAR yes 112436396
chr19 10866274 10866283 SNAI2 JASPAR yes 70803045
chr19 10866274 10866283 SNAI2 JASPAR yes 112436397
chr19 10866274 10866284 FIGLA JASPAR yes 70803046
chr19 10866274 10866284 ID4 JASPAR yes 70803047
chr19 10866274 10866284 TCF3 JASPAR yes 70803048
chr19 10866274 10866284 TCF4 JASPAR yes 70803049
chr19 10866274 10866284 FIGLA JASPAR yes 112436398
chr19 10866274 10866284 ID4 JASPAR yes 112436399
chr19 10866274 10866284 TCF3 JASPAR yes 112436400
chr19 10866274 10866284 TCF4 JASPAR yes 112436401
SNP sites on vista28602[chr19:10865897-10866291]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10865897 rs77456631 A G
CEBPB
5438948
chr19 10865908 rs141737221 C T
CEBPB GLI2
5438949
chr19 10865930 rs115015838 T A
ATF1 CEBPB
5438950
chr19 10865947 rs146256979 A G
CEBPB PEA3
5438951
chr19 10866115 rs75490171 G A,T no 5438952
chr19 10866142 rs34019172 C CT
FOXP1 IRF1
5438953
chr19 10866239 rs372361603 C T no 5438954
Genes possibly regulated by vista28602[chr19:10865897-10866291]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10812106 10824113 + QTRT1 ENSG00000213339.4 10812106 0.77 1.0 17021 46209
chr19 10828755 10944164 + DNM2 ENSG00000079805.12 10828755 0.7 1.0 17022 62858
chr19 10943114 10946994 - TMED1 ENSG00000099203.2 10946994 0.67 1.0 17023 19297
chr19 10947251 10980466 + C19orf38 ENSG00000214212.4 10947251 0.95 0.99 17024 19040
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28602[chr19:10865897-10866291]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results