EnhancerDB
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Enhancers that have rs34019172[chr19:10866142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 10865897 10866291 vista28602
VISTA
Transcript factors that have rs34019172[chr19:10866142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10865651 10866201 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849002
chr19 10865651 10866201 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108383843
chr19 10865737 10866193 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849003
chr19 10865737 10866193 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108383844
chr19 10865881 10866191 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849006
chr19 10865881 10866191 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108383849
chr19 10865902 10866167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849008
chr19 10865902 10866167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108383851
chr19 10866134 10866155 IRF1 JASPAR yes 70803030
chr19 10866134 10866155 IRF1 JASPAR yes 112436382
chr19 10866136 10866157 IRF1 JASPAR yes 70803031
chr19 10866136 10866157 IRF1 JASPAR yes 112436383
chr19 10866137 10866152 FOXP1 JASPAR yes 70803032
chr19 10866137 10866152 FOXP1 JASPAR yes 112436384
chr19 10866139 10866154 FOXP1 JASPAR yes 70803033
chr19 10866139 10866154 FOXP1 JASPAR yes 112436385
chr19 10866141 10866156 FOXP1 JASPAR yes 70803034
chr19 10866141 10866156 FOXP1 JASPAR yes 112436386
chr19 10866142 10866157 FOXP1 JASPAR yes 70803035
chr19 10866142 10866157 FOXP1 JASPAR yes 112436387
Genes associated with rs34019172[chr19:10866142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More