EnhancerDB
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  3. vista28607[chr19:10983266-10983642]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28607[chr19:10983266-10983642]
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Tissue distribution of vista28607
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Transcription factor that possibly regulate vista28607[chr19:10983266-10983642]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10983276 10983279 MYB TRANSFAC yes 70803266
chr19 10983313 10983331 IRF2 JASPAR yes 70803267
chr19 10983313 10983331 IRF2 JASPAR yes 112441543
chr19 10983316 10983327 DMRT3 JASPAR yes 70803268
chr19 10983316 10983327 DMRT3 JASPAR yes 112441544
chr19 10983316 10983331 STAT2 JASPAR yes 70803269
chr19 10983316 10983331 STAT2 JASPAR yes 112441545
chr19 10983317 10983331 STAT1 JASPAR yes 70803270
chr19 10983317 10983331 STAT1 JASPAR yes 112441546
chr19 10983323 10983327 YY1 TRANSFAC yes 70803271
chr19 10983323 10983327 YY1 TRANSFAC yes 112441547
chr19 10983324 10983334 NFATC3 JASPAR yes 70803272
chr19 10983324 10983334 NFATC3 JASPAR yes 112441548
chr19 10983326 10983332 ETS1 JASPAR yes 70803273
chr19 10983326 10983332 ETS1 JASPAR yes 112441549
chr19 10983329 10983341 NHLH1 JASPAR yes 70803274
chr19 10983329 10983341 NHLH1 JASPAR yes 112441550
chr19 10983351 10983355 YY1 TRANSFAC yes 70803275
chr19 10983351 10983355 YY1 TRANSFAC yes 112441551
chr19 10983356 10983370 E2F7 JASPAR yes 70803276
chr19 10983356 10983370 E2F7 JASPAR yes 112441552
chr19 10983363 10983377 STAT1 JASPAR yes 70803277
chr19 10983363 10983377 STAT1 JASPAR yes 112441553
chr19 10983363 10983378 STAT2 JASPAR yes 70803278
chr19 10983363 10983378 STAT2 JASPAR yes 112441554
chr19 10983390 10983410 RREB1 JASPAR yes 70803279
chr19 10983390 10983410 RREB1 JASPAR yes 112441555
chr19 10983393 10983413 RREB1 JASPAR yes 70803280
chr19 10983393 10983413 RREB1 JASPAR yes 112441556
chr19 10983394 10983404 ZNF740 JASPAR yes 70803281
chr19 10983394 10983404 ZNF740 JASPAR yes 112441557
chr19 10983395 10983415 RREB1 JASPAR yes 70803282
chr19 10983395 10983415 RREB1 JASPAR yes 112441558
chr19 10983398 10983408 SP1 JASPAR yes 70803283
chr19 10983398 10983408 SP1 JASPAR yes 112441559
chr19 10983404 10983414 SP1 JASPAR yes 70803284
chr19 10983404 10983414 SP1 JASPAR yes 112441560
chr19 10983417 10983423 LEF1 TRANSFAC yes 70803285
chr19 10983417 10983423 SOX10 JASPAR yes 70803286
chr19 10983417 10983423 LEF1 TRANSFAC yes 112441561
chr19 10983417 10983423 SOX10 JASPAR yes 112441562
chr19 10983430 10983451 ZNF263 JASPAR yes 70803287
chr19 10983430 10983451 ZNF263 JASPAR yes 112441563
chr19 10983433 10983454 ZNF263 JASPAR yes 70803288
chr19 10983433 10983454 ZNF263 JASPAR yes 112441564
chr19 10983443 10983464 ZNF263 JASPAR yes 70803289
chr19 10983443 10983464 ZNF263 JASPAR yes 112441565
chr19 10983445 10983459 GATA2 JASPAR yes 70803290
chr19 10983445 10983459 GATA2 JASPAR yes 112441566
chr19 10983449 10983457 GATA3 JASPAR yes 70803291
chr19 10983449 10983457 GATA5 JASPAR yes 70803292
chr19 10983449 10983457 GATA3 JASPAR yes 112441567
chr19 10983449 10983457 GATA5 JASPAR yes 112441568
chr19 10983458 10983473 LEF1 JASPAR yes 70803293
chr19 10983458 10983473 LEF1 JASPAR yes 112441569
chr19 10983462 10983468 LEF1 TRANSFAC yes 70803294
chr19 10983462 10983468 TCF4 TRANSFAC yes 70803295
chr19 10983462 10983468 LEF1 TRANSFAC yes 112441570
chr19 10983462 10983468 TCF4 TRANSFAC yes 112441571
chr19 10983468 10983473 ETS2 TRANSFAC yes 70803296
chr19 10983468 10983473 ETS2 TRANSFAC yes 112441572
chr19 10983479 10983483 YY1 TRANSFAC yes 70803297
chr19 10983479 10983483 YY1 TRANSFAC yes 112441573
chr19 10983497 10983501 YY1 TRANSFAC yes 70803298
chr19 10983497 10983501 YY1 TRANSFAC yes 112441574
chr19 10983504 10983510 SOX10 JASPAR yes 70803299
chr19 10983504 10983510 SOX10 JASPAR yes 112441575
chr19 10983520 10983539 PAX5 JASPAR yes 70803300
chr19 10983520 10983539 PAX5 JASPAR yes 112441576
chr19 10983531 10983545 EBF1 JASPAR yes 70803301
chr19 10983531 10983545 EBF1 JASPAR yes 112441577
chr19 10983532 10983544 TFAP2A JASPAR yes 70803302
chr19 10983532 10983544 TFAP2B JASPAR yes 70803303
chr19 10983532 10983544 TFAP2C JASPAR yes 70803304
chr19 10983532 10983544 TFAP2A JASPAR yes 112441578
chr19 10983532 10983544 TFAP2B JASPAR yes 112441579
chr19 10983532 10983544 TFAP2C JASPAR yes 112441580
chr19 10983532 10983547 TFAP2A JASPAR yes 70803305
chr19 10983532 10983547 TFAP2C JASPAR yes 70803306
chr19 10983532 10983547 TFAP2A JASPAR yes 112441581
chr19 10983532 10983547 TFAP2C JASPAR yes 112441582
chr19 10983533 10983542 TFAP2A JASPAR yes 70803307
chr19 10983533 10983542 TFAP2A JASPAR yes 112441583
chr19 10983533 10983544 EBF1 JASPAR yes 70803308
chr19 10983533 10983544 EBF1 JASPAR yes 112441584
chr19 10983537 10983542 TFAP2A TRANSFAC yes 70803309
chr19 10983537 10983542 TFAP2A TRANSFAC yes 112441585
chr19 10983537 10983543 MZF1 JASPAR yes 70803310
chr19 10983537 10983543 MZF1 JASPAR yes 112441586
chr19 10983537 10983550 NFKB1 JASPAR yes 70803311
chr19 10983537 10983550 NFKB1 JASPAR yes 112441587
chr19 10983538 10983549 NFKB1 JASPAR yes 70803312
chr19 10983538 10983549 NFKB1 JASPAR yes 112441588
chr19 10983546 10983557 EBF1 JASPAR yes 70803313
chr19 10983546 10983557 EBF1 JASPAR yes 112441589
chr19 10983560 10983579 REST JASPAR yes 70803314
chr19 10983560 10983579 REST JASPAR yes 112441590
chr19 10983571 10983575 H4TF2 TRANSFAC yes 70803315
chr19 10983571 10983575 H4TF2 TRANSFAC yes 112441591
chr19 10983590 10983609 RFX2 JASPAR yes 70803316
chr19 10983590 10983609 RFX2 JASPAR yes 112441592
chr19 10983614 10983619 ETS2 TRANSFAC yes 70803317
chr19 10983614 10983619 ETS2 TRANSFAC yes 112441593
chr19 10983615 10983626 NFKB1 JASPAR yes 70803318
chr19 10983615 10983626 NFKB1 JASPAR yes 112441594
chr19 10983616 10983626 RELA JASPAR yes 70803319
chr19 10983616 10983626 REL JASPAR yes 70803320
chr19 10983616 10983626 RELA JASPAR yes 112441595
chr19 10983616 10983626 REL JASPAR yes 112441596
SNP sites on vista28607[chr19:10983266-10983642]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10983286 rs148956731 C T no 5439517
chr19 10983331 rs147023979 C T
ETS1 IRF2 NFATC3 NHLH1 STAT1 STAT2
5439518
chr19 10983541 rs372617522 G A
EBF1 MZF1 NFKB1 TFAP2A TFAP2B TFAP2C
5439519
Genes possibly regulated by vista28607[chr19:10983266-10983642]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10943114 10946994 - TMED1 ENSG00000099203.2 10946994 0.67 1.0 17023 63728
chr19 10947251 10980466 + C19orf38 ENSG00000214212.4 10947251 0.95 0.99 17024 63985
chr19 10982189 11033453 + CARM1 ENSG00000142453.7 10982189 0.64 1.0 17025 98923
chr19 11033444 11039357 - YIPF2 ENSG00000130733.6 11039357 0.61 1.0 17026 44285
chr19 11039409 11044211 + C19orf52 ENSG00000142444.6 11039409 0.6 0.99 17027 44233
chr19 11071598 11176071 + SMARCA4 ENSG00000127616.13 11071598 0.8 1.0 17028 12044
Expression level of Genes
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miRNAs possibly regulated by vista28607[chr19:10983266-10983642]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results