EnhancerDB
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  3. rs372617522[chr19:10983541]
Enhancers that have rs372617522[chr19:10983541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983266 10983642 vista28607
VISTA
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs372617522[chr19:10983541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10983385 10984913 ZNF143 GTRD no Epithelial (MCF-7) 21849085
chr19 10983385 10984913 ZNF143 GTRD no Epithelial (MCF-7) 108384154
chr19 10983385 10984913 ZNF143 GTRD no Epithelial (MCF-7) 108384155
chr19 10983388 10983652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849086
chr19 10983388 10983652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384156
chr19 10983531 10983545 EBF1 JASPAR yes 70803301
chr19 10983531 10983545 EBF1 JASPAR yes 112441577
chr19 10983532 10983544 TFAP2A JASPAR yes 70803302
chr19 10983532 10983544 TFAP2B JASPAR yes 70803303
chr19 10983532 10983544 TFAP2C JASPAR yes 70803304
chr19 10983532 10983544 TFAP2A JASPAR yes 112441578
chr19 10983532 10983544 TFAP2B JASPAR yes 112441579
chr19 10983532 10983544 TFAP2C JASPAR yes 112441580
chr19 10983532 10983547 TFAP2A JASPAR yes 70803305
chr19 10983532 10983547 TFAP2C JASPAR yes 70803306
chr19 10983532 10983547 TFAP2A JASPAR yes 112441581
chr19 10983532 10983547 TFAP2C JASPAR yes 112441582
chr19 10983533 10983542 TFAP2A JASPAR yes 70803307
chr19 10983533 10983542 TFAP2A JASPAR yes 112441583
chr19 10983533 10983544 EBF1 JASPAR yes 70803308
chr19 10983533 10983544 EBF1 JASPAR yes 112441584
chr19 10983537 10983542 TFAP2A TRANSFAC yes 70803309
chr19 10983537 10983542 TFAP2A TRANSFAC yes 112441585
chr19 10983537 10983543 MZF1 JASPAR yes 70803310
chr19 10983537 10983543 MZF1 JASPAR yes 112441586
chr19 10983537 10983550 NFKB1 JASPAR yes 70803311
chr19 10983537 10983550 NFKB1 JASPAR yes 112441587
chr19 10983538 10983549 NFKB1 JASPAR yes 70803312
chr19 10983538 10983549 NFKB1 JASPAR yes 112441588
Genes associated with rs372617522[chr19:10983541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More