EnhancerDB
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  3. vista28609[chr19:10987245-10987998]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28609[chr19:10987245-10987998]
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Tissue distribution of vista28609
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Transcription factor that possibly regulate vista28609[chr19:10987245-10987998]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10987347 10987659 SPI1 UCSC Txn Factor no Conserved 108384175
chr19 10987349 10987920 NFIC UCSC Txn Factor no Conserved 108384178
chr19 10987385 10987910 RUNX3 UCSC Txn Factor no Conserved 108384185
chr19 10987405 10987670 IRF4 UCSC Txn Factor no Conserved 108384193
chr19 10987408 10987738 BHLHE40 UCSC Txn Factor no Conserved 108384195
chr19 10987409 10987674 BATF UCSC Txn Factor no Conserved 108384197
chr19 10987236 10987248 PKNOX2 JASPAR yes 70803333
chr19 10987236 10987248 PKNOX2 JASPAR yes 112441769
chr19 10987237 10987247 ID4 JASPAR yes 70803334
chr19 10987237 10987247 ID4 JASPAR yes 112441770
chr19 10987254 10987258 NFE TRANSFAC yes 70803335
chr19 10987254 10987258 NFE TRANSFAC yes 112441771
chr19 10987260 10987264 NFE TRANSFAC yes 70803336
chr19 10987260 10987264 NFE TRANSFAC yes 112441772
chr19 10987270 10987290 PPARG JASPAR yes 70803337
chr19 10987270 10987290 PPARG JASPAR yes 112441773
chr19 10987290 10987296 YY1 JASPAR yes 70803338
chr19 10987290 10987296 YY1 JASPAR yes 112441774
chr19 10987293 10987313 ESR1 JASPAR yes 70803339
chr19 10987293 10987313 ESR1 JASPAR yes 112441775
chr19 10987295 10987315 PPARG JASPAR yes 70803340
chr19 10987295 10987315 PPARG JASPAR yes 112441776
chr19 10987296 10987314 ESR1 JASPAR yes 70803341
chr19 10987296 10987314 ESR1 JASPAR yes 112441777
chr19 10987297 10987315 ESR2 JASPAR yes 70803342
chr19 10987297 10987315 ESR2 JASPAR yes 112441778
chr19 10987298 10987313 ESR2 JASPAR yes 70803343
chr19 10987298 10987313 ESR2 JASPAR yes 112441779
chr19 10987298 10987318 ESR1 JASPAR yes 70803344
chr19 10987298 10987318 ESR1 JASPAR yes 112441780
chr19 10987323 10987328 NFY TRANSFAC yes 70803345
chr19 10987323 10987328 NFY TRANSFAC yes 112441781
chr19 10987325 10987339 TLX1 JASPAR yes 70803346
chr19 10987325 10987339 TLX1 JASPAR yes 112441782
chr19 10987326 10987340 TLX1 JASPAR yes 70803347
chr19 10987326 10987340 TLX1 JASPAR yes 112441783
chr19 10987355 10987359 YY1 TRANSFAC yes 70803348
chr19 10987355 10987359 YY1 TRANSFAC yes 112441784
chr19 10987373 10987384 NFKB1 JASPAR yes 70803349
chr19 10987373 10987384 NFKB1 JASPAR yes 112441785
chr19 10987392 10987405 ELF1 JASPAR yes 70803350
chr19 10987392 10987405 ELF1 JASPAR yes 112441786
chr19 10987415 10987421 NFIC JASPAR yes 70803351
chr19 10987415 10987421 NFIC JASPAR yes 112441787
chr19 10987421 10987435 NR2F1 JASPAR yes 70803352
chr19 10987421 10987435 NR2F1 JASPAR yes 112441788
chr19 10987421 10987436 HNF4G JASPAR yes 70803353
chr19 10987421 10987436 HNF4G JASPAR yes 112441789
chr19 10987435 10987444 HIC2 JASPAR yes 70803354
chr19 10987435 10987444 HIC2 JASPAR yes 112441790
chr19 10987438 10987442 LFA1 TRANSFAC yes 70803355
chr19 10987438 10987442 LFA1 TRANSFAC yes 112441791
chr19 10987445 10987464 CTCF JASPAR yes 70803356
chr19 10987445 10987464 CTCF JASPAR yes 112441792
chr19 10987460 10987474 SPI1 JASPAR yes 70803357
chr19 10987460 10987474 SPI1 JASPAR yes 112441793
chr19 10987479 10987485 MAZ TRANSFAC yes 70803358
chr19 10987479 10987485 MAZ TRANSFAC yes 112441794
chr19 10987483 10987500 BCL6B JASPAR yes 70803359
chr19 10987483 10987500 BCL6B JASPAR yes 112441795
chr19 10987484 10987499 STAT1 JASPAR yes 70803360
chr19 10987484 10987499 STAT1 JASPAR yes 112441796
chr19 10987486 10987497 STAT1 JASPAR yes 70803361
chr19 10987486 10987497 STAT3 JASPAR yes 70803362
chr19 10987486 10987497 STAT1 JASPAR yes 112441797
chr19 10987486 10987497 STAT3 JASPAR yes 112441798
chr19 10987508 10987523 PRDM1 JASPAR yes 70803363
chr19 10987508 10987523 PRDM1 JASPAR yes 112441799
chr19 10987519 10987525 MZF1 JASPAR yes 70803364
chr19 10987519 10987525 MZF1 JASPAR yes 112441800
chr19 10987536 10987551 STAT1 JASPAR yes 70803365
chr19 10987536 10987551 STAT1 JASPAR yes 112441801
chr19 10987538 10987549 STAT1 JASPAR yes 70803366
chr19 10987538 10987549 STAT3 JASPAR yes 70803367
chr19 10987538 10987549 STAT1 JASPAR yes 112441802
chr19 10987538 10987549 STAT3 JASPAR yes 112441803
chr19 10987539 10987550 STAT3 JASPAR yes 70803368
chr19 10987539 10987550 STAT3 JASPAR yes 112441804
chr19 10987539 10987554 HSF1 JASPAR yes 70803369
chr19 10987539 10987554 HSF1 JASPAR yes 112441805
chr19 10987553 10987565 IRF1 JASPAR yes 70803370
chr19 10987553 10987565 IRF1 JASPAR yes 112441806
chr19 10987557 10987572 PRDM1 JASPAR yes 70803371
chr19 10987557 10987572 STAT2 JASPAR yes 70803372
chr19 10987557 10987572 PRDM1 JASPAR yes 112441807
chr19 10987557 10987572 STAT2 JASPAR yes 112441808
chr19 10987572 10987576 ESR1 TRANSFAC yes 70803373
chr19 10987572 10987576 ESR1 TRANSFAC yes 112441809
chr19 10987579 10987597 ESR1 JASPAR yes 70803374
chr19 10987579 10987597 ESR1 JASPAR yes 112441810
chr19 10987581 10987601 ESR1 JASPAR yes 70803375
chr19 10987581 10987601 ESR1 JASPAR yes 112441811
chr19 10987624 10987643 REST JASPAR yes 70803376
chr19 10987624 10987643 REST JASPAR yes 112441812
chr19 10987625 10987646 MAFG JASPAR yes 70803377
chr19 10987625 10987646 MAFG JASPAR yes 112441813
chr19 10987678 10987698 TP53 JASPAR yes 70803378
chr19 10987678 10987698 TP53 JASPAR yes 112441814
chr19 10987680 10987684 LFA1 TRANSFAC yes 70803379
chr19 10987680 10987684 LFA1 TRANSFAC yes 112441815
chr19 10987691 10987706 HNF4G JASPAR yes 70803380
chr19 10987691 10987706 NR2C2 JASPAR yes 70803381
chr19 10987691 10987706 HNF4G JASPAR yes 112441816
chr19 10987691 10987706 NR2C2 JASPAR yes 112441817
chr19 10987691 10987709 RARA JASPAR yes 70803382
chr19 10987691 10987709 RARA JASPAR yes 112441818
chr19 10987692 10987706 RXRB JASPAR yes 70803383
chr19 10987692 10987706 RXRG JASPAR yes 70803384
chr19 10987692 10987706 RXRB JASPAR yes 112441819
chr19 10987692 10987706 RXRG JASPAR yes 112441820
chr19 10987698 10987712 TCF7L2 JASPAR yes 70803385
chr19 10987698 10987712 TCF7L2 JASPAR yes 112441821
chr19 10987698 10987713 LEF1 JASPAR yes 70803386
chr19 10987698 10987713 LEF1 JASPAR yes 112441822
chr19 10987716 10987722 SOX10 JASPAR yes 70803387
chr19 10987716 10987722 SOX10 JASPAR yes 112441823
chr19 10987717 10987735 SRF JASPAR yes 70803388
chr19 10987717 10987735 SRF JASPAR yes 112441824
chr19 10987719 10987735 SRF JASPAR yes 70803389
chr19 10987719 10987735 SRF JASPAR yes 112441825
chr19 10987738 10987752 TLX1 JASPAR yes 70803390
chr19 10987738 10987752 TLX1 JASPAR yes 112441826
chr19 10987745 10987753 MEIS2 JASPAR yes 70803391
chr19 10987745 10987753 MEIS3 JASPAR yes 70803392
chr19 10987745 10987753 MEIS2 JASPAR yes 112441827
chr19 10987745 10987753 MEIS3 JASPAR yes 112441828
chr19 10987746 10987750 NFE TRANSFAC yes 70803393
chr19 10987746 10987750 NFE TRANSFAC yes 112441829
chr19 10987760 10987765 SP1 TRANSFAC yes 70803394
chr19 10987760 10987765 SP1 TRANSFAC yes 112441830
chr19 10987760 10987778 ESR1 JASPAR yes 70803395
chr19 10987760 10987778 ESR1 JASPAR yes 112441831
chr19 10987761 10987776 ESR2 JASPAR yes 70803396
chr19 10987761 10987776 ESR2 JASPAR yes 112441832
chr19 10987772 10987779 SPI1 JASPAR yes 70803397
chr19 10987772 10987779 SPI1 JASPAR yes 112441833
chr19 10987772 10987780 FEV JASPAR yes 70803398
chr19 10987772 10987780 FEV JASPAR yes 112441834
chr19 10987774 10987779 ETS2 TRANSFAC yes 70803399
chr19 10987774 10987779 ETS2 TRANSFAC yes 112441835
chr19 10987791 10987804 NFKB1 JASPAR yes 70803400
chr19 10987791 10987804 NFKB1 JASPAR yes 112441836
chr19 10987792 10987803 NFKB1 JASPAR yes 70803401
chr19 10987792 10987803 NFKB1 JASPAR yes 112441837
chr19 10987793 10987803 RELA JASPAR yes 70803402
chr19 10987793 10987803 RELA JASPAR yes 112441838
chr19 10987796 10987808 INSM1 JASPAR yes 70803403
chr19 10987796 10987808 INSM1 JASPAR yes 112441839
chr19 10987804 10987814 TFAP4 JASPAR yes 70803404
chr19 10987804 10987814 TFAP4 JASPAR yes 112441840
chr19 10987811 10987821 SP1 JASPAR yes 70803405
chr19 10987811 10987821 SP1 JASPAR yes 112441841
chr19 10987812 10987816 LFA1 TRANSFAC yes 70803406
chr19 10987812 10987816 LFA1 TRANSFAC yes 112441842
chr19 10987852 10987869 RARA JASPAR yes 70803407
chr19 10987852 10987869 RARA JASPAR yes 112441843
chr19 10987871 10987881 SREBF2 JASPAR yes 70803408
chr19 10987871 10987881 SREBF2 JASPAR yes 112441844
chr19 10987880 10987895 PRDM1 JASPAR yes 70803409
chr19 10987880 10987895 PRDM1 JASPAR yes 112441845
chr19 10987896 10987899 MYB TRANSFAC yes 70803410
chr19 10987896 10987899 MYB TRANSFAC yes 112441846
chr19 10987896 10987908 INSM1 JASPAR yes 70803411
chr19 10987896 10987908 INSM1 JASPAR yes 112441847
chr19 10987910 10987914 YY1 TRANSFAC yes 70803412
chr19 10987910 10987914 YY1 TRANSFAC yes 112441848
chr19 10987940 10987949 VENTX JASPAR yes 70803413
chr19 10987940 10987949 VENTX JASPAR yes 112441849
chr19 10987945 10987950 GATA2 JASPAR yes 70803414
chr19 10987945 10987950 GATA2 JASPAR yes 112441850
chr19 10987954 10987958 YY1 TRANSFAC yes 70803415
chr19 10987954 10987958 YY1 TRANSFAC yes 112441851
chr19 10987965 10987969 YY1 TRANSFAC yes 70803416
chr19 10987965 10987969 YY1 TRANSFAC yes 112441852
chr19 10987969 10987974 GATA2 JASPAR yes 70803417
chr19 10987969 10987974 GATA2 JASPAR yes 112441853
chr19 10987994 10988009 FOXA1 JASPAR yes 70803418
chr19 10987994 10988009 FOXA1 JASPAR yes 112441854
chr19 10987996 10988008 FOXC2 JASPAR yes 70803419
chr19 10987996 10988008 FOXC2 JASPAR yes 112441855
chr19 10987997 10988008 BATF JASPAR yes 70803420
chr19 10987997 10988008 BATF JASPAR yes 112441856
chr19 10987998 10988009 FOXA1 JASPAR yes 70803421
chr19 10987998 10988009 FOXA1 JASPAR yes 112441857
SNP sites on vista28609[chr19:10987245-10987998]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10987404 rs542024625 C T
ELF1 NFIC RUNX3 SPI1
5439570
chr19 10987492 rs77258486 G A
BATF BCL6B BHLHE40 IRF4 NFIC RUNX3 SPI1 STAT1 STAT3
5439571
chr19 10987584 rs374247397 G A
BATF BHLHE40 ESR1 IRF4 NFIC RUNX3 SPI1
5439572
chr19 10987653 rs115725277 C T
BATF BHLHE40 IRF4 NFIC RUNX3 SPI1
5439573
chr19 10987952 rs534330181 C T no 5439574
Genes possibly regulated by vista28609[chr19:10987245-10987998]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10943114 10946994 - TMED1 ENSG00000099203.2 10946994 0.67 1.0 17023 59749
chr19 10947251 10980466 + C19orf38 ENSG00000214212.4 10947251 0.95 0.99 17024 60006
chr19 10982189 11033453 + CARM1 ENSG00000142453.7 10982189 0.64 1.0 17025 94944
chr19 11033444 11039357 - YIPF2 ENSG00000130733.6 11039357 0.61 1.0 17026 48641
chr19 11039409 11044211 + C19orf52 ENSG00000142444.6 11039409 0.6 0.99 17027 48589
chr19 11071598 11176071 + SMARCA4 ENSG00000127616.13 11071598 0.8 1.0 17028 16400
Expression level of Genes
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miRNAs possibly regulated by vista28609[chr19:10987245-10987998]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results