EnhancerDB
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  3. vista28612[chr19:10992105-10992492]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28612[chr19:10992105-10992492]
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Tissue distribution of vista28612
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Transcription factor that possibly regulate vista28612[chr19:10992105-10992492]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10992103 10992108 NFY TRANSFAC yes 70803509
chr19 10992103 10992108 NFY TRANSFAC yes 112442506
chr19 10992135 10992146 EBF1 JASPAR yes 70803510
chr19 10992135 10992146 EBF1 JASPAR yes 112442507
chr19 10992164 10992185 ZNF263 JASPAR yes 70803511
chr19 10992164 10992185 ZNF263 JASPAR yes 112442508
chr19 10992165 10992169 LFA1 TRANSFAC yes 70803512
chr19 10992165 10992169 LFA1 TRANSFAC yes 112442509
chr19 10992167 10992178 FLI1 JASPAR yes 70803513
chr19 10992167 10992178 FLI1 JASPAR yes 112442510
chr19 10992168 10992176 EHF JASPAR yes 70803514
chr19 10992168 10992176 EHF JASPAR yes 112442511
chr19 10992179 10992183 LFA1 TRANSFAC yes 70803515
chr19 10992179 10992183 LFA1 TRANSFAC yes 112442512
chr19 10992184 10992195 ESRRA JASPAR yes 70803516
chr19 10992184 10992195 ESRRB JASPAR yes 70803517
chr19 10992184 10992195 ESRRA JASPAR yes 112442513
chr19 10992184 10992195 ESRRB JASPAR yes 112442514
chr19 10992184 10992197 NR2F1 JASPAR yes 70803518
chr19 10992184 10992197 NR2F1 JASPAR yes 112442515
chr19 10992186 10992194 NR4A2 JASPAR yes 70803519
chr19 10992186 10992194 NR4A2 JASPAR yes 112442516
chr19 10992188 10992192 ESR1 TRANSFAC yes 70803520
chr19 10992188 10992192 ESR1 TRANSFAC yes 112442517
chr19 10992188 10992199 USF1 JASPAR yes 70803521
chr19 10992188 10992199 USF1 JASPAR yes 112442518
chr19 10992191 10992206 ZBTB33 JASPAR yes 70803522
chr19 10992191 10992206 ZBTB33 JASPAR yes 112442519
chr19 10992202 10992217 NR2C2 JASPAR yes 70803523
chr19 10992202 10992217 NR2C2 JASPAR yes 112442520
chr19 10992203 10992220 ESR1 JASPAR yes 70803524
chr19 10992203 10992220 ESR1 JASPAR yes 112442521
chr19 10992205 10992209 ESR1 TRANSFAC yes 70803525
chr19 10992205 10992209 ESR1 TRANSFAC yes 112442522
chr19 10992210 10992223 SMAD2 JASPAR yes 70803526
chr19 10992210 10992223 SMAD2 JASPAR yes 112442523
chr19 10992224 10992229 SP1 TRANSFAC yes 70803527
chr19 10992224 10992229 SP1 TRANSFAC yes 112442524
chr19 10992228 10992232 ESR1 TRANSFAC yes 70803528
chr19 10992228 10992232 ESR1 TRANSFAC yes 112442525
chr19 10992236 10992241 H4TF1 TRANSFAC yes 70803529
chr19 10992236 10992241 H4TF1 TRANSFAC yes 112442526
chr19 10992247 10992260 NR2F1 JASPAR yes 70803530
chr19 10992247 10992260 NR2F1 JASPAR yes 112442527
chr19 10992247 10992267 PPARG JASPAR yes 70803531
chr19 10992247 10992267 PPARG JASPAR yes 112442528
chr19 10992249 10992257 NR4A2 JASPAR yes 70803532
chr19 10992249 10992257 NR4A2 JASPAR yes 112442529
chr19 10992249 10992263 RXRB JASPAR yes 70803533
chr19 10992249 10992263 RXRG JASPAR yes 70803534
chr19 10992249 10992263 RXRB JASPAR yes 112442530
chr19 10992249 10992263 RXRG JASPAR yes 112442531
chr19 10992251 10992255 ESR1 TRANSFAC yes 70803535
chr19 10992251 10992255 ESR1 TRANSFAC yes 112442532
chr19 10992254 10992265 USF1 JASPAR yes 70803536
chr19 10992254 10992265 USF2 JASPAR yes 70803537
chr19 10992254 10992265 USF1 JASPAR yes 112442533
chr19 10992254 10992265 USF2 JASPAR yes 112442534
chr19 10992256 10992269 NR2F1 JASPAR yes 70803538
chr19 10992256 10992269 NR2F1 JASPAR yes 112442535
chr19 10992259 10992267 NR4A2 JASPAR yes 70803539
chr19 10992259 10992267 NR4A2 JASPAR yes 112442536
chr19 10992260 10992268 CREB1 JASPAR yes 70803540
chr19 10992260 10992268 CREB1 JASPAR yes 112442537
chr19 10992276 10992289 TFAP2B JASPAR yes 70803541
chr19 10992276 10992289 TFAP2C JASPAR yes 70803542
chr19 10992276 10992289 TFAP2B JASPAR yes 112442538
chr19 10992276 10992289 TFAP2C JASPAR yes 112442539
chr19 10992277 10992288 EBF1 JASPAR yes 70803543
chr19 10992277 10992288 EBF1 JASPAR yes 112442540
chr19 10992277 10992290 TFAP2B JASPAR yes 70803544
chr19 10992277 10992290 TFAP2B JASPAR yes 112442541
chr19 10992279 10992299 RREB1 JASPAR yes 70803545
chr19 10992279 10992299 RREB1 JASPAR yes 112442542
chr19 10992283 10992304 ZNF263 JASPAR yes 70803546
chr19 10992283 10992304 ZNF263 JASPAR yes 112442543
chr19 10992284 10992304 RREB1 JASPAR yes 70803547
chr19 10992284 10992304 RREB1 JASPAR yes 112442544
chr19 10992284 10992305 ZNF263 JASPAR yes 70803548
chr19 10992284 10992305 ZNF263 JASPAR yes 112442545
chr19 10992285 10992305 RREB1 JASPAR yes 70803549
chr19 10992285 10992305 RREB1 JASPAR yes 112442546
chr19 10992291 10992308 RXRA JASPAR yes 70803550
chr19 10992291 10992308 RXRA JASPAR yes 112442547
chr19 10992292 10992297 SP1 TRANSFAC yes 70803551
chr19 10992292 10992297 SP1 TRANSFAC yes 112442548
chr19 10992293 10992303 ZNF740 JASPAR yes 70803552
chr19 10992293 10992303 ZNF740 JASPAR yes 112442549
chr19 10992295 10992304 SP1 TRANSFAC yes 70803553
chr19 10992295 10992304 SP1 TRANSFAC yes 112442550
chr19 10992295 10992305 SP1 JASPAR yes 70803554
chr19 10992295 10992305 SP1 JASPAR yes 112442551
chr19 10992297 10992303 MAZ TRANSFAC yes 70803555
chr19 10992297 10992303 MAZ TRANSFAC yes 112442552
chr19 10992300 10992313 SMAD2 JASPAR yes 70803556
chr19 10992300 10992313 SMAD2 JASPAR yes 112442553
chr19 10992301 10992306 SP1 TRANSFAC yes 70803557
chr19 10992301 10992306 SP1 TRANSFAC yes 112442554
chr19 10992308 10992318 NEUROG2 JASPAR yes 70803558
chr19 10992308 10992318 NEUROG2 JASPAR yes 112442555
chr19 10992312 10992318 YY1 JASPAR yes 70803559
chr19 10992312 10992318 YY1 JASPAR yes 112442556
chr19 10992340 10992359 REST JASPAR yes 70803560
chr19 10992340 10992359 REST JASPAR yes 112442557
chr19 10992354 10992374 ESR1 JASPAR yes 70803561
chr19 10992354 10992374 ESR1 JASPAR yes 112442558
chr19 10992356 10992376 PPARG JASPAR yes 70803562
chr19 10992356 10992376 PPARG JASPAR yes 112442559
chr19 10992358 10992375 ESR1 JASPAR yes 70803563
chr19 10992358 10992375 ESR1 JASPAR yes 112442560
chr19 10992358 10992376 ESR1 JASPAR yes 70803564
chr19 10992358 10992376 ESR2 JASPAR yes 70803565
chr19 10992358 10992376 ESR1 JASPAR yes 112442561
chr19 10992358 10992376 ESR2 JASPAR yes 112442562
chr19 10992359 10992374 ESR2 JASPAR yes 70803566
chr19 10992359 10992374 ESR2 JASPAR yes 112442563
chr19 10992359 10992379 ESR1 JASPAR yes 70803567
chr19 10992359 10992379 ESR1 JASPAR yes 112442564
chr19 10992364 10992377 NR2F1 JASPAR yes 70803568
chr19 10992364 10992377 NR2F1 JASPAR yes 112442565
chr19 10992366 10992377 ESRRA JASPAR yes 70803569
chr19 10992366 10992377 ESRRA JASPAR yes 112442566
chr19 10992367 10992375 NR4A2 JASPAR yes 70803570
chr19 10992367 10992375 NR4A2 JASPAR yes 112442567
chr19 10992376 10992386 SP1 JASPAR yes 70803571
chr19 10992376 10992386 SP1 JASPAR yes 112442568
chr19 10992416 10992437 IRF1 JASPAR yes 70803572
chr19 10992416 10992437 IRF1 JASPAR yes 112442569
chr19 10992420 10992435 PRDM1 JASPAR yes 70803573
chr19 10992420 10992435 PRDM1 JASPAR yes 112442570
chr19 10992479 10992497 MAFF JASPAR yes 70803574
chr19 10992479 10992497 MAFF JASPAR yes 112442571
chr19 10992480 10992495 MAFK JASPAR yes 70803575
chr19 10992480 10992495 MAFK JASPAR yes 112442572
chr19 10992483 10992487 ESR1 TRANSFAC yes 70803576
chr19 10992483 10992487 ESR1 TRANSFAC yes 112442573
chr19 10992484 10992495 NRL JASPAR yes 70803577
chr19 10992484 10992495 NRL JASPAR yes 112442574
SNP sites on vista28612[chr19:10992105-10992492]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10992280 rs543955977 C T
EBF1 RREB1 TFAP2B TFAP2C
5439610
chr19 10992416 rs191856331 G C
IRF1
5439611
chr19 10992455 rs187652587 C T no 5439612
chr19 10992469 rs77011416 C T no 5439613
Genes possibly regulated by vista28612[chr19:10992105-10992492]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10943114 10946994 - TMED1 ENSG00000099203.2 10946994 0.67 1.0 17023 54889
chr19 10947251 10980466 + C19orf38 ENSG00000214212.4 10947251 0.95 0.99 17024 55146
chr19 10982189 11033453 + CARM1 ENSG00000142453.7 10982189 0.64 1.0 17025 90084
chr19 11033444 11039357 - YIPF2 ENSG00000130733.6 11039357 0.61 1.0 17026 53135
chr19 11039409 11044211 + C19orf52 ENSG00000142444.6 11039409 0.6 0.99 17027 53083
chr19 11071598 11176071 + SMARCA4 ENSG00000127616.13 11071598 0.8 1.0 17028 20894
Expression level of Genes
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miRNAs possibly regulated by vista28612[chr19:10992105-10992492]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results