EnhancerDB
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  3. rs543955977[chr19:10992280]
Enhancers that have rs543955977[chr19:10992280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 10992105 10992492 vista28612
VISTA
Transcript factors that have rs543955977[chr19:10992280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10992046 10992446 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849152
chr19 10992046 10992446 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108384235
chr19 10992053 10992389 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849153
chr19 10992053 10992389 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384236
chr19 10992065 10992365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849154
chr19 10992065 10992365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384237
chr19 10992092 10992496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849155
chr19 10992092 10992496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108384238
chr19 10992098 10992328 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21849156
chr19 10992098 10992328 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108384239
chr19 10992186 10992446 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21849157
chr19 10992186 10992446 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108384240
chr19 10992276 10992289 TFAP2B JASPAR yes 70803541
chr19 10992276 10992289 TFAP2C JASPAR yes 70803542
chr19 10992276 10992289 TFAP2B JASPAR yes 112442538
chr19 10992276 10992289 TFAP2C JASPAR yes 112442539
chr19 10992277 10992288 EBF1 JASPAR yes 70803543
chr19 10992277 10992288 EBF1 JASPAR yes 112442540
chr19 10992277 10992290 TFAP2B JASPAR yes 70803544
chr19 10992277 10992290 TFAP2B JASPAR yes 112442541
chr19 10992279 10992299 RREB1 JASPAR yes 70803545
chr19 10992279 10992299 RREB1 JASPAR yes 112442542
Genes associated with rs543955977[chr19:10992280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More