EnhancerDB
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  3. vista28628[chr19:11601973-11602308]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28628[chr19:11601973-11602308]
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Tissue distribution of vista28628
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Transcription factor that possibly regulate vista28628[chr19:11601973-11602308]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11601900 11602216 ZNF143 UCSC Txn Factor no Conserved 108385231
chr19 11601934 11602220 USF1 UCSC Txn Factor no Conserved 108385242
chr19 11601969 11602242 NFYB UCSC Txn Factor no Conserved 108385249
chr19 11602007 11602017 GABPA JASPAR yes 70804517
chr19 11602007 11602017 GABPA JASPAR yes 112467569
chr19 11602007 11602020 ELF1 JASPAR yes 70804518
chr19 11602007 11602020 ELF1 JASPAR yes 112467570
chr19 11602007 11602022 STAT1 JASPAR yes 70804519
chr19 11602007 11602022 STAT1 JASPAR yes 112467571
chr19 11602009 11602020 STAT1 JASPAR yes 70804520
chr19 11602009 11602020 STAT3 JASPAR yes 70804521
chr19 11602009 11602020 STAT1 JASPAR yes 112467572
chr19 11602009 11602020 STAT3 JASPAR yes 112467573
chr19 11602009 11602024 RFX5 JASPAR yes 70804522
chr19 11602009 11602024 RFX5 JASPAR yes 112467574
chr19 11602016 11602027 GCM1 JASPAR yes 70804523
chr19 11602016 11602027 GCM1 JASPAR yes 112467575
chr19 11602031 11602051 TP53 JASPAR yes 70804524
chr19 11602031 11602051 TP53 JASPAR yes 112467576
chr19 11602032 11602036 YY1 TRANSFAC yes 70804525
chr19 11602032 11602036 YY1 TRANSFAC yes 112467577
chr19 11602032 11602047 STAT1 JASPAR yes 70804526
chr19 11602032 11602047 STAT1 JASPAR yes 112467578
chr19 11602034 11602045 STAT1 JASPAR yes 70804527
chr19 11602034 11602045 STAT3 JASPAR yes 70804528
chr19 11602034 11602045 STAT1 JASPAR yes 112467579
chr19 11602034 11602045 STAT3 JASPAR yes 112467580
chr19 11602048 11602064 T JASPAR yes 70804529
chr19 11602048 11602064 T JASPAR yes 112467581
chr19 11602056 11602064 TBX5 JASPAR yes 70804530
chr19 11602056 11602064 TBX5 JASPAR yes 112467582
chr19 11602062 11602073 USF1 JASPAR yes 70804531
chr19 11602062 11602073 USF1 JASPAR yes 112467583
chr19 11602063 11602073 NEUROD2 JASPAR yes 70804532
chr19 11602063 11602073 NEUROD2 JASPAR yes 112467584
chr19 11602063 11602074 USF1 JASPAR yes 70804533
chr19 11602063 11602074 USF2 JASPAR yes 70804534
chr19 11602063 11602074 USF1 JASPAR yes 112467585
chr19 11602063 11602074 USF2 JASPAR yes 112467586
chr19 11602064 11602074 MAX JASPAR yes 70804535
chr19 11602064 11602074 MAX JASPAR yes 112467587
chr19 11602076 11602091 NFYB JASPAR yes 70804536
chr19 11602076 11602091 NFYB JASPAR yes 112467588
chr19 11602078 11602094 NFYA JASPAR yes 70804537
chr19 11602078 11602094 NFYA JASPAR yes 112467589
chr19 11602083 11602087 H1TF2 TRANSFAC yes 70804538
chr19 11602083 11602087 NFE TRANSFAC yes 70804539
chr19 11602083 11602087 SRF TRANSFAC yes 70804540
chr19 11602083 11602087 H1TF2 TRANSFAC yes 112467590
chr19 11602083 11602087 NFE TRANSFAC yes 112467591
chr19 11602083 11602087 SRF TRANSFAC yes 112467592
chr19 11602086 11602096 TEAD1 JASPAR yes 70804541
chr19 11602086 11602096 TEAD4 JASPAR yes 70804542
chr19 11602086 11602096 TEAD1 JASPAR yes 112467593
chr19 11602086 11602096 TEAD4 JASPAR yes 112467594
chr19 11602087 11602095 TEAD3 JASPAR yes 70804543
chr19 11602087 11602095 TEAD3 JASPAR yes 112467595
chr19 11602100 11602109 SNAI2 JASPAR yes 70804544
chr19 11602100 11602109 SNAI2 JASPAR yes 112467596
chr19 11602100 11602110 ID4 JASPAR yes 70804545
chr19 11602100 11602110 TCF3 JASPAR yes 70804546
chr19 11602100 11602110 TCF4 JASPAR yes 70804547
chr19 11602100 11602110 ID4 JASPAR yes 112467597
chr19 11602100 11602110 TCF3 JASPAR yes 112467598
chr19 11602100 11602110 TCF4 JASPAR yes 112467599
chr19 11602134 11602140 MZF1 JASPAR yes 70804548
chr19 11602134 11602140 MZF1 JASPAR yes 112467600
chr19 11602175 11602183 EHF JASPAR yes 70804549
chr19 11602175 11602183 EHF JASPAR yes 112467601
chr19 11602179 11602184 ETS2 TRANSFAC yes 70804550
chr19 11602179 11602184 ETS2 TRANSFAC yes 112467602
chr19 11602193 11602197 H4TF2 TRANSFAC yes 70804551
chr19 11602193 11602197 H4TF2 TRANSFAC yes 112467603
chr19 11602198 11602212 TCF7L2 JASPAR yes 70804552
chr19 11602198 11602212 TCF7L2 JASPAR yes 112467604
chr19 11602198 11602213 LEF1 JASPAR yes 70804553
chr19 11602198 11602213 LEF1 JASPAR yes 112467605
chr19 11602202 11602208 TCF4 TRANSFAC yes 70804554
chr19 11602202 11602208 TCF4 TRANSFAC yes 112467606
chr19 11602217 11602229 YY1 JASPAR yes 70804555
chr19 11602217 11602229 YY1 JASPAR yes 112467607
chr19 11602235 11602241 LEF1 TRANSFAC yes 70804556
chr19 11602235 11602241 SOX10 JASPAR yes 70804557
chr19 11602235 11602241 LEF1 TRANSFAC yes 112467608
chr19 11602235 11602241 SOX10 JASPAR yes 112467609
chr19 11602260 11602274 CREB3L1 JASPAR yes 70804558
chr19 11602260 11602274 CREB3L1 JASPAR yes 112467610
chr19 11602261 11602272 NFE2L2 JASPAR yes 70804559
chr19 11602261 11602272 NFE2L2 JASPAR yes 112467611
chr19 11602266 11602270 ESR1 TRANSFAC yes 70804560
chr19 11602266 11602270 ESR1 TRANSFAC yes 112467612
chr19 11602301 11602314 ATF4 JASPAR yes 70804561
chr19 11602301 11602314 ATF4 JASPAR yes 112467613
SNP sites on vista28628[chr19:11601973-11602308]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11602020 rs117612878 C G
ELF1 GCM1 NFYB RFX5 STAT1 STAT3 USF1 ZNF143
5443095
Genes possibly regulated by vista28628[chr19:11601973-11602308]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11495017 11530018 - RGL3 ENSG00000205517.8 11530018 0.93 1.0 17041 28045
chr19 11531272 11546603 - CCDC151 ENSG00000198003.7 11546603 0.84 1.0 17042 44630
chr19 11546109 11561783 + PRKCSH ENSG00000130175.5 11546109 0.71 1.0 17043 44136
chr19 11562141 11591861 - ELAVL3 ENSG00000196361.5 11591861 0.89 0.98 17044 89888
chr19 11577055 11616513 - CTC-398G3.6 ENSG00000267477.1 11616513 0.99 1.0 17045 85795
chr19 11594242 11616738 - ZNF653 ENSG00000161914.5 11616738 0.6 1.0 17046 85570
chr19 11616731 11639989 - ECSIT ENSG00000130159.9 11639989 0.56 1.0 17047 62319
chr19 11649532 11661138 + CNN1 ENSG00000130176.3 11649532 0.93 0.97 17048 52776
chr19 11661962 11670051 - ELOF1 ENSG00000130165.6 11670051 0.75 0.99 17049 32257
chr19 11670189 11729950 + ZNF627 ENSG00000198551.5 11670189 0.8 0.99 17050 32119
chr19 11685475 11689823 - ACP5 ENSG00000102575.6 11689823 0.9 0.96 17051 12485
Expression level of Genes
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miRNAs possibly regulated by vista28628[chr19:11601973-11602308]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results