EnhancerDB
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  3. rs117612878[chr19:11602020]
Enhancers that have rs117612878[chr19:11602020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11599645 11604171 enh52846
Prostate (RWPE1) Liver (HepG2) Large Intestine
chr19 11601973 11602308 vista28628
VISTA
Transcript factors that have rs117612878[chr19:11602020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11601761 11602217 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849720
chr19 11601761 11602217 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108385225
chr19 11601846 11602096 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385226
chr19 11601853 11602217 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108385227
chr19 11601873 11602233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385228
chr19 11601879 11602269 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385229
chr19 11601900 11602190 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108385230
chr19 11601900 11602216 ZNF143 UCSC Txn Factor no Conserved 108385231
chr19 11601901 11602225 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385232
chr19 11601908 11602284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108385233
chr19 11601910 11602240 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385234
chr19 11601915 11602239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385235
chr19 11601917 11602193 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385236
chr19 11601917 11602207 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385237
chr19 11601924 11602200 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108385238
chr19 11601925 11602215 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108385239
chr19 11601926 11602216 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108385240
chr19 11601928 11602172 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385241
chr19 11601934 11602220 USF1 UCSC Txn Factor no Conserved 108385242
chr19 11601939 11602209 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385243
chr19 11601941 11602177 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385244
chr19 11601946 11602210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849721
chr19 11601946 11602210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108385245
chr19 11601950 11602220 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108385246
chr19 11601965 11602099 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849722
chr19 11601965 11602099 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108385247
chr19 11601966 11602180 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385248
chr19 11601969 11602242 NFYB UCSC Txn Factor no Conserved 108385249
chr19 11601969 11602242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385250
chr19 11601974 11602167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108385251
chr19 11601977 11602159 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849723
chr19 11601977 11602159 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108385252
chr19 11601980 11602226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108385253
chr19 11601982 11602202 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108385254
chr19 11602006 11602139 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108385255
chr19 11602007 11602020 ELF1 JASPAR yes 70804518
chr19 11602007 11602020 ELF1 JASPAR yes 112467570
chr19 11602007 11602022 STAT1 JASPAR yes 70804519
chr19 11602007 11602022 STAT1 JASPAR yes 112467571
chr19 11602009 11602020 STAT1 JASPAR yes 70804520
chr19 11602009 11602020 STAT3 JASPAR yes 70804521
chr19 11602009 11602020 STAT1 JASPAR yes 112467572
chr19 11602009 11602020 STAT3 JASPAR yes 112467573
chr19 11602009 11602024 RFX5 JASPAR yes 70804522
chr19 11602009 11602024 RFX5 JASPAR yes 112467574
chr19 11602016 11602027 GCM1 JASPAR yes 70804523
chr19 11602016 11602027 GCM1 JASPAR yes 112467575
Genes associated with rs117612878[chr19:11602020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More