EnhancerDB
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  3. vista28681[chr19:13148637-13149083]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28681[chr19:13148637-13149083]
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Tissue distribution of vista28681
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Transcription factor that possibly regulate vista28681[chr19:13148637-13149083]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13148651 13148656 ETS2 TRANSFAC yes 70808012
chr19 13148651 13148656 ETS2 TRANSFAC yes 112503699
chr19 13148674 13148688 EBF1 JASPAR yes 70808013
chr19 13148674 13148688 EBF1 JASPAR yes 112503700
chr19 13148676 13148691 RFX5 JASPAR yes 70808014
chr19 13148676 13148691 RFX5 JASPAR yes 112503701
chr19 13148686 13148692 SOX10 JASPAR yes 70808015
chr19 13148686 13148692 SOX10 JASPAR yes 112503702
chr19 13148688 13148692 LFA1 TRANSFAC yes 70808016
chr19 13148688 13148692 LFA1 TRANSFAC yes 112503703
chr19 13148706 13148710 NFE TRANSFAC yes 70808017
chr19 13148706 13148710 NFE TRANSFAC yes 112503704
chr19 13148709 13148714 ATF1 TRANSFAC yes 70808018
chr19 13148709 13148714 ATF1 TRANSFAC yes 112503705
chr19 13148738 13148751 TFAP2B JASPAR yes 70808019
chr19 13148738 13148751 TFAP2B JASPAR yes 112503706
chr19 13148749 13148767 ESR2 JASPAR yes 70808020
chr19 13148749 13148767 ESR2 JASPAR yes 112503707
chr19 13148758 13148772 ZIC1 JASPAR yes 70808021
chr19 13148758 13148772 ZIC1 JASPAR yes 112503708
chr19 13148769 13148781 GLI2 JASPAR yes 70808022
chr19 13148769 13148781 GLI2 JASPAR yes 112503709
chr19 13148786 13148790 H1TF2 TRANSFAC yes 70808023
chr19 13148786 13148790 NFE TRANSFAC yes 70808024
chr19 13148786 13148790 SRF TRANSFAC yes 70808025
chr19 13148786 13148790 H1TF2 TRANSFAC yes 112503710
chr19 13148786 13148790 NFE TRANSFAC yes 112503711
chr19 13148786 13148790 SRF TRANSFAC yes 112503712
chr19 13148795 13148810 TP53 JASPAR yes 70808026
chr19 13148795 13148810 TP53 JASPAR yes 112503713
chr19 13148829 13148837 EHF JASPAR yes 70808027
chr19 13148829 13148837 EHF JASPAR yes 112503714
chr19 13148850 13148865 FOXP1 JASPAR yes 70808028
chr19 13148850 13148865 FOXP1 JASPAR yes 112503715
chr19 13148851 13148862 FOXP2 JASPAR yes 70808029
chr19 13148851 13148862 FOXP2 JASPAR yes 112503716
chr19 13148853 13148864 FOXA1 JASPAR yes 70808030
chr19 13148853 13148864 FOXA1 JASPAR yes 112503717
chr19 13148860 13148878 NFYA JASPAR yes 70808031
chr19 13148860 13148878 NFYA JASPAR yes 112503718
chr19 13148863 13148879 NFYA JASPAR yes 70808032
chr19 13148863 13148879 NFYA JASPAR yes 112503719
chr19 13148864 13148870 LEF1 TRANSFAC yes 70808033
chr19 13148864 13148870 TCF4 TRANSFAC yes 70808034
chr19 13148864 13148870 LEF1 TRANSFAC yes 112503720
chr19 13148864 13148870 TCF4 TRANSFAC yes 112503721
chr19 13148865 13148877 PBX1 JASPAR yes 70808035
chr19 13148865 13148877 PBX1 JASPAR yes 112503722
chr19 13148866 13148881 NFYB JASPAR yes 70808036
chr19 13148866 13148881 NFYB JASPAR yes 112503723
chr19 13148867 13148887 RREB1 JASPAR yes 70808037
chr19 13148867 13148887 RREB1 JASPAR yes 112503724
chr19 13148868 13148873 NFY TRANSFAC yes 70808038
chr19 13148868 13148873 NFY TRANSFAC yes 112503725
chr19 13148883 13148898 RUNX2 JASPAR yes 70808039
chr19 13148883 13148898 RUNX2 JASPAR yes 112503726
chr19 13148884 13148888 NFE TRANSFAC yes 70808040
chr19 13148884 13148888 NFE TRANSFAC yes 112503727
chr19 13148902 13148919 BCL6B JASPAR yes 70808041
chr19 13148902 13148919 BCL6B JASPAR yes 112503728
chr19 13148903 13148918 STAT1 JASPAR yes 70808042
chr19 13148903 13148918 STAT1 JASPAR yes 112503729
chr19 13148905 13148916 STAT1 JASPAR yes 70808043
chr19 13148905 13148916 STAT3 JASPAR yes 70808044
chr19 13148905 13148916 STAT1 JASPAR yes 112503730
chr19 13148905 13148916 STAT3 JASPAR yes 112503731
chr19 13148909 13148917 FEV JASPAR yes 70808045
chr19 13148909 13148917 FEV JASPAR yes 112503732
chr19 13148932 13148945 NFKB2 JASPAR yes 70808046
chr19 13148932 13148945 NFKB2 JASPAR yes 112503733
chr19 13148933 13148943 REL JASPAR yes 70808047
chr19 13148933 13148943 REL JASPAR yes 112503734
chr19 13148933 13148944 NFKB1 JASPAR yes 70808048
chr19 13148933 13148944 NFKB1 JASPAR yes 112503735
chr19 13148967 13148971 YY1 TRANSFAC yes 70808049
chr19 13148967 13148971 YY1 TRANSFAC yes 112503736
chr19 13148975 13148981 YY1 JASPAR yes 70808050
chr19 13148975 13148981 YY1 JASPAR yes 112503737
chr19 13148991 13149002 NRL JASPAR yes 70808051
chr19 13148991 13149002 NRL JASPAR yes 112503738
chr19 13149001 13149021 TP63 JASPAR yes 70808052
chr19 13149001 13149021 TP63 JASPAR yes 112503739
chr19 13149002 13149006 H4TF2 TRANSFAC yes 70808053
chr19 13149002 13149006 H4TF2 TRANSFAC yes 112503740
chr19 13149033 13149039 ZNF354C JASPAR yes 70808054
chr19 13149033 13149039 ZNF354C JASPAR yes 112503741
chr19 13149036 13149040 NFE TRANSFAC yes 70808055
chr19 13149036 13149040 NFE TRANSFAC yes 112503742
chr19 13149041 13149057 POU4F2 JASPAR yes 70808056
chr19 13149041 13149057 POU4F2 JASPAR yes 112503743
chr19 13149050 13149054 YY1 TRANSFAC yes 70808057
chr19 13149050 13149054 YY1 TRANSFAC yes 112503744
chr19 13149054 13149060 TBP TRANSFAC yes 70808058
chr19 13149054 13149060 TBP TRANSFAC yes 112503745
chr19 13149062 13149072 NFATC3 JASPAR yes 70808059
chr19 13149062 13149072 NFATC3 JASPAR yes 112503746
chr19 13149064 13149067 MYB TRANSFAC yes 70808060
chr19 13149064 13149067 MYB TRANSFAC yes 112503747
chr19 13149064 13149071 NFATC2 JASPAR yes 70808061
chr19 13149064 13149071 NFATC2 JASPAR yes 112503748
chr19 13149066 13149084 MAFF JASPAR yes 70808062
chr19 13149066 13149084 MAFF JASPAR yes 112503749
chr19 13149067 13149082 MAFK JASPAR yes 70808063
chr19 13149067 13149082 MAFK JASPAR yes 112503750
chr19 13149077 13149081 LFA1 TRANSFAC yes 70808064
chr19 13149077 13149081 LFA1 TRANSFAC yes 112503751
chr19 13149083 13149087 NFE TRANSFAC yes 70808065
chr19 13149083 13149087 NFE TRANSFAC yes 112503752
SNP sites on vista28681[chr19:13148637-13149083]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13148670 rs78154271 A G no 5448287
chr19 13148771 rs149102806 T C
GLI2 ZIC1
5448288
chr19 13148946 rs78221001 T C no 5448289
Genes possibly regulated by vista28681[chr19:13148637-13149083]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 755
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 8032
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 19413
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 27336
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 57785
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 35108
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 20702
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 20166
Expression level of Genes
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miRNAs possibly regulated by vista28681[chr19:13148637-13149083]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results