EnhancerDB
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  3. rs78154271[chr19:13148670]
Enhancers that have rs78154271[chr19:13148670]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13148637 13149083 vista28681
VISTA
Transcript factors that have rs78154271[chr19:13148670]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13148507 13149915 TEF1 GTRD no Bone (Osteoblast) 21850251
chr19 13148507 13149915 TEF1 GTRD no Bone (Osteoblast) 108387634
chr19 13148599 13153768 ZNF274 GTRD no Liver (HepG2) 21850252
chr19 13148599 13153768 ZNF274 GTRD no Liver (HepG2) 108387635
chr19 13148599 13153768 ZNF274 GTRD no Liver (HepG2) 108387636
chr19 13148600 13149227 ZNF274 GTRD no Blood (GM12878) 108387637
chr19 13148660 13149214 ZNF274 GTRD no Blood (GM12878) 108387638
Genes associated with rs78154271[chr19:13148670], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More