EnhancerDB
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  3. vista28688[chr19:13181358-13181806]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28688[chr19:13181358-13181806]
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Tissue distribution of vista28688
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Transcription factor that possibly regulate vista28688[chr19:13181358-13181806]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13181309 13181677 YY1 UCSC Txn Factor no Conserved 108388713
chr19 13181359 13181363 H4TF2 TRANSFAC yes 70808331
chr19 13181359 13181363 H4TF2 TRANSFAC yes 112507855
chr19 13181365 13181370 H4TF1 TRANSFAC yes 70808332
chr19 13181365 13181370 H4TF1 TRANSFAC yes 112507856
chr19 13181375 13181396 REST JASPAR yes 70808333
chr19 13181375 13181396 REST JASPAR yes 112507857
chr19 13181406 13181421 NR2C2 JASPAR yes 70808334
chr19 13181406 13181421 NR2C2 JASPAR yes 112507858
chr19 13181409 13181421 INSM1 JASPAR yes 70808335
chr19 13181409 13181421 INSM1 JASPAR yes 112507859
chr19 13181414 13181419 SP1 TRANSFAC yes 70808336
chr19 13181414 13181419 SP1 TRANSFAC yes 112507860
chr19 13181414 13181421 SP1 TRANSFAC yes 70808337
chr19 13181414 13181421 SP1 TRANSFAC yes 112507861
chr19 13181426 13181442 ZNF143 JASPAR yes 70808338
chr19 13181426 13181442 ZNF143 JASPAR yes 112507862
chr19 13181438 13181449 TFAP2A JASPAR yes 70808339
chr19 13181438 13181449 TFAP2B JASPAR yes 70808340
chr19 13181438 13181449 TFAP2C JASPAR yes 70808341
chr19 13181438 13181449 TFAP2A JASPAR yes 112507863
chr19 13181438 13181449 TFAP2B JASPAR yes 112507864
chr19 13181438 13181449 TFAP2C JASPAR yes 112507865
chr19 13181463 13181475 YY1 JASPAR yes 70808342
chr19 13181463 13181475 YY1 JASPAR yes 112507866
chr19 13181466 13181472 YY1 JASPAR yes 70808343
chr19 13181466 13181472 YY1 JASPAR yes 112507867
chr19 13181472 13181478 NFIC JASPAR yes 70808344
chr19 13181472 13181478 NFIC JASPAR yes 112507868
chr19 13181482 13181494 YY1 JASPAR yes 70808345
chr19 13181482 13181494 YY1 JASPAR yes 112507869
chr19 13181490 13181499 THAP1 JASPAR yes 70808346
chr19 13181490 13181499 THAP1 JASPAR yes 112507870
chr19 13181495 13181516 REST JASPAR yes 70808347
chr19 13181495 13181516 REST JASPAR yes 112507871
chr19 13181501 13181510 TFAP2A JASPAR yes 70808348
chr19 13181501 13181510 TFAP2A JASPAR yes 112507872
chr19 13181512 13181524 TFAP2A JASPAR yes 70808349
chr19 13181512 13181524 TFAP2B JASPAR yes 70808350
chr19 13181512 13181524 TFAP2C JASPAR yes 70808351
chr19 13181512 13181524 TFAP2A JASPAR yes 112507873
chr19 13181512 13181524 TFAP2B JASPAR yes 112507874
chr19 13181512 13181524 TFAP2C JASPAR yes 112507875
chr19 13181513 13181522 TFAP2A JASPAR yes 70808352
chr19 13181513 13181522 TFAP2A JASPAR yes 112507876
chr19 13181519 13181531 HES5 JASPAR yes 70808353
chr19 13181519 13181531 HES7 JASPAR yes 70808354
chr19 13181519 13181531 HES5 JASPAR yes 112507877
chr19 13181519 13181531 HES7 JASPAR yes 112507878
chr19 13181520 13181530 HEY1 JASPAR yes 70808355
chr19 13181520 13181530 HEY2 JASPAR yes 70808356
chr19 13181520 13181530 HEY1 JASPAR yes 112507879
chr19 13181520 13181530 HEY2 JASPAR yes 112507880
chr19 13181526 13181538 INSM1 JASPAR yes 70808357
chr19 13181526 13181538 INSM1 JASPAR yes 112507881
chr19 13181550 13181570 TP63 JASPAR yes 70808358
chr19 13181550 13181570 TP63 JASPAR yes 112507882
chr19 13181592 13181595 MYB TRANSFAC yes 70808359
chr19 13181592 13181595 MYB TRANSFAC yes 112507883
chr19 13181601 13181604 MYB TRANSFAC yes 70808360
chr19 13181601 13181604 MYB TRANSFAC yes 112507884
chr19 13181610 13181620 SP1 JASPAR yes 70808361
chr19 13181610 13181620 SP1 JASPAR yes 112507885
chr19 13181633 13181638 H4TF1 TRANSFAC yes 70808362
chr19 13181633 13181638 H4TF1 TRANSFAC yes 112507886
chr19 13181633 13181643 ERF JASPAR yes 70808363
chr19 13181633 13181643 ERG JASPAR yes 70808364
chr19 13181633 13181643 ETS1 JASPAR yes 70808365
chr19 13181633 13181643 FLI1 JASPAR yes 70808366
chr19 13181633 13181643 ERF JASPAR yes 112507887
chr19 13181633 13181643 ERG JASPAR yes 112507888
chr19 13181633 13181643 ETS1 JASPAR yes 112507889
chr19 13181633 13181643 FLI1 JASPAR yes 112507890
chr19 13181633 13181644 ETV2 JASPAR yes 70808367
chr19 13181633 13181644 ETV2 JASPAR yes 112507891
chr19 13181634 13181642 FEV JASPAR yes 70808368
chr19 13181634 13181642 FEV JASPAR yes 112507892
chr19 13181639 13181643 NFE TRANSFAC yes 70808369
chr19 13181639 13181643 NFE TRANSFAC yes 112507893
chr19 13181643 13181647 NFE TRANSFAC yes 70808370
chr19 13181643 13181647 NFE TRANSFAC yes 112507894
chr19 13181665 13181669 YY1 TRANSFAC yes 70808371
chr19 13181665 13181669 YY1 TRANSFAC yes 112507895
chr19 13181703 13181709 SOX10 JASPAR yes 70808372
chr19 13181703 13181709 SOX10 JASPAR yes 112507896
chr19 13181711 13181722 E2F6 JASPAR yes 70808373
chr19 13181711 13181722 E2F6 JASPAR yes 112507897
chr19 13181724 13181728 NFE TRANSFAC yes 70808374
chr19 13181724 13181728 NFE TRANSFAC yes 112507898
chr19 13181731 13181741 SP1 JASPAR yes 70808375
chr19 13181731 13181741 SP1 JASPAR yes 112507899
chr19 13181742 13181753 NRF1 JASPAR yes 70808376
chr19 13181742 13181753 NRF1 JASPAR yes 112507900
chr19 13181743 13181754 NRF1 JASPAR yes 70808377
chr19 13181743 13181754 NRF1 JASPAR yes 112507901
chr19 13181744 13181752 NRF1 TRANSFAC yes 70808378
chr19 13181744 13181752 NRF1 TRANSFAC yes 112507902
chr19 13181753 13181759 ZNF354C JASPAR yes 70808379
chr19 13181753 13181759 ZNF354C JASPAR yes 112507903
chr19 13181759 13181770 NRF1 JASPAR yes 70808380
chr19 13181759 13181770 NRF1 JASPAR yes 112507904
chr19 13181771 13181775 LFA1 TRANSFAC yes 70808381
chr19 13181771 13181775 LFA1 TRANSFAC yes 112507905
chr19 13181771 13181782 USF2 JASPAR yes 70808382
chr19 13181771 13181782 USF2 JASPAR yes 112507906
chr19 13181772 13181782 TFEB JASPAR yes 70808383
chr19 13181772 13181782 TFEC JASPAR yes 70808384
chr19 13181772 13181782 TFEB JASPAR yes 112507907
chr19 13181772 13181782 TFEC JASPAR yes 112507908
chr19 13181772 13181783 USF1 JASPAR yes 70808385
chr19 13181772 13181783 USF1 JASPAR yes 112507909
chr19 13181784 13181790 YY1 JASPAR yes 70808386
chr19 13181784 13181790 YY1 JASPAR yes 112507910
SNP sites on vista28688[chr19:13181358-13181806]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13181421 rs74786963 G A
INSM1 NR2C2 SP1 YY1
5448594
chr19 13181445 rs111671024 C T
TFAP2A TFAP2B TFAP2C YY1
5448595
chr19 13181523 rs552994112 C T
HES5 HES7 HEY1 HEY2 TFAP2A TFAP2B TFAP2C YY1
5448596
chr19 13181788 rs145799474 A C
YY1
5448597
Genes possibly regulated by vista28688[chr19:13181358-13181806]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 25064
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 67831
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 53425
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 52889
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 20609
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 20577
Expression level of Genes
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miRNAs possibly regulated by vista28688[chr19:13181358-13181806]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results