EnhancerDB
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  3. rs111671024[chr19:13181445]
Enhancers that have rs111671024[chr19:13181445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr19 13181358 13181806 vista28688
VISTA
Transcript factors that have rs111671024[chr19:13181445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13180005 13182585 ZNF274 GTRD no Blood (GM12878) 108388648
chr19 13180005 13182585 ZNF274 GTRD no Blood (GM12878) 108388649
chr19 13180819 13181566 TCF7L2 GTRD no Colon (HCT116) 21850664
chr19 13180819 13181566 TCF7L2 GTRD no Colon (HCT116) 108388711
chr19 13181309 13181677 YY1 UCSC Txn Factor no Conserved 108388713
chr19 13181352 13181607 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388714
chr19 13181359 13181609 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388715
chr19 13181389 13181592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108388716
chr19 13181438 13181449 TFAP2A JASPAR yes 70808339
chr19 13181438 13181449 TFAP2B JASPAR yes 70808340
chr19 13181438 13181449 TFAP2C JASPAR yes 70808341
chr19 13181438 13181449 TFAP2A JASPAR yes 112507863
chr19 13181438 13181449 TFAP2B JASPAR yes 112507864
chr19 13181438 13181449 TFAP2C JASPAR yes 112507865
Genes associated with rs111671024[chr19:13181445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More