EnhancerDB
  1. Home
  2. Enhancers
  3. vista28718[chr19:13954357-13954714]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28718[chr19:13954357-13954714]
Back to top
Tissue distribution of vista28718
Back to top
Transcription factor that possibly regulate vista28718[chr19:13954357-13954714]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13954301 13954610 STAT3 UCSC Txn Factor no Conserved 108390148
chr19 13954340 13954836 TCF7L2 UCSC Txn Factor no Conserved 108390153
chr19 13954489 13954719 TFAP2C UCSC Txn Factor no Conserved 108390160
chr19 13954345 13954364 RFX2 JASPAR yes 70810257
chr19 13954345 13954364 RFX2 JASPAR yes 112537202
chr19 13954349 13954365 RFX5 JASPAR yes 70810258
chr19 13954349 13954365 RFX5 JASPAR yes 112537203
chr19 13954364 13954378 STAT1 JASPAR yes 70810259
chr19 13954364 13954378 STAT1 JASPAR yes 112537204
chr19 13954369 13954384 RFX5 JASPAR yes 70810260
chr19 13954369 13954384 RFX5 JASPAR yes 112537205
chr19 13954372 13954376 H4TF2 TRANSFAC yes 70810261
chr19 13954372 13954376 H4TF2 TRANSFAC yes 112537206
chr19 13954373 13954393 ESR1 JASPAR yes 70810262
chr19 13954373 13954393 ESR1 JASPAR yes 112537207
chr19 13954378 13954398 ESR1 JASPAR yes 70810263
chr19 13954378 13954398 ESR1 JASPAR yes 112537208
chr19 13954392 13954410 ESR2 JASPAR yes 70810264
chr19 13954392 13954410 ESR2 JASPAR yes 112537209
chr19 13954394 13954409 ESR2 JASPAR yes 70810265
chr19 13954394 13954409 ESR2 JASPAR yes 112537210
chr19 13954394 13954414 ESR1 JASPAR yes 70810266
chr19 13954394 13954414 ESR1 JASPAR yes 112537211
chr19 13954401 13954405 H4TF2 TRANSFAC yes 70810267
chr19 13954401 13954405 H4TF2 TRANSFAC yes 112537212
chr19 13954404 13954410 SP1 TRANSFAC yes 70810268
chr19 13954404 13954410 SP1 TRANSFAC yes 112537213
chr19 13954404 13954414 SP1 JASPAR yes 70810269
chr19 13954404 13954414 SP1 JASPAR yes 112537214
chr19 13954407 13954417 MZF1 JASPAR yes 70810270
chr19 13954407 13954417 MZF1 JASPAR yes 112537215
chr19 13954416 13954431 STAT1 JASPAR yes 70810271
chr19 13954416 13954431 STAT1 JASPAR yes 112537216
chr19 13954418 13954429 STAT1 JASPAR yes 70810272
chr19 13954418 13954429 STAT3 JASPAR yes 70810273
chr19 13954418 13954429 STAT1 JASPAR yes 112537217
chr19 13954418 13954429 STAT3 JASPAR yes 112537218
chr19 13954427 13954437 SP1 JASPAR yes 70810274
chr19 13954427 13954437 SP1 JASPAR yes 112537219
chr19 13954429 13954439 ZNF740 JASPAR yes 70810275
chr19 13954429 13954439 ZNF740 JASPAR yes 112537220
chr19 13954433 13954447 ZIC1 JASPAR yes 70810276
chr19 13954433 13954447 ZIC1 JASPAR yes 112537221
chr19 13954433 13954448 ZIC3 JASPAR yes 70810277
chr19 13954433 13954448 ZIC4 JASPAR yes 70810278
chr19 13954433 13954448 ZIC3 JASPAR yes 112537222
chr19 13954433 13954448 ZIC4 JASPAR yes 112537223
chr19 13954448 13954459 STAT1 JASPAR yes 70810279
chr19 13954448 13954459 STAT1 JASPAR yes 112537224
chr19 13954452 13954465 NFKB2 JASPAR yes 70810280
chr19 13954452 13954465 NFKB2 JASPAR yes 112537225
chr19 13954453 13954463 NFKB1 JASPAR yes 70810281
chr19 13954453 13954463 NFKB1 JASPAR yes 112537226
chr19 13954453 13954464 NFKB1 JASPAR yes 70810282
chr19 13954453 13954464 NFKB1 JASPAR yes 112537227
chr19 13954454 13954464 NFKB1 JASPAR yes 70810283
chr19 13954454 13954464 RELA JASPAR yes 70810284
chr19 13954454 13954464 REL JASPAR yes 70810285
chr19 13954454 13954464 NFKB1 JASPAR yes 112537228
chr19 13954454 13954464 RELA JASPAR yes 112537229
chr19 13954454 13954464 REL JASPAR yes 112537230
chr19 13954454 13954465 NFKB1 JASPAR yes 70810286
chr19 13954454 13954465 NFKB1 JASPAR yes 112537231
chr19 13954494 13954515 ZNF263 JASPAR yes 70810287
chr19 13954494 13954515 ZNF263 JASPAR yes 112537232
chr19 13954506 13954517 E2F6 JASPAR yes 70810288
chr19 13954506 13954517 E2F6 JASPAR yes 112537233
chr19 13954528 13954532 NFE TRANSFAC yes 70810289
chr19 13954528 13954532 NFE TRANSFAC yes 112537234
chr19 13954530 13954551 ZNF263 JASPAR yes 70810290
chr19 13954530 13954551 ZNF263 JASPAR yes 112537235
chr19 13954532 13954543 E2F4 JASPAR yes 70810291
chr19 13954532 13954543 E2F6 JASPAR yes 70810292
chr19 13954532 13954543 E2F4 JASPAR yes 112537236
chr19 13954532 13954543 E2F6 JASPAR yes 112537237
chr19 13954533 13954540 E2F1 TRANSFAC yes 70810293
chr19 13954533 13954540 E2F1 TRANSFAC yes 112537238
chr19 13954533 13954541 E2F1 JASPAR yes 70810294
chr19 13954533 13954541 E2F1 JASPAR yes 112537239
chr19 13954533 13954544 E2F1 JASPAR yes 70810295
chr19 13954533 13954544 E2F1 JASPAR yes 112537240
chr19 13954540 13954561 ZNF263 JASPAR yes 70810296
chr19 13954540 13954561 ZNF263 JASPAR yes 112537241
chr19 13954562 13954568 PEA3 TRANSFAC yes 70810297
chr19 13954562 13954568 PEA3 TRANSFAC yes 112537242
chr19 13954576 13954585 SOX9 JASPAR yes 70810298
chr19 13954576 13954585 SOX9 JASPAR yes 112537243
chr19 13954597 13954612 TFAP2A JASPAR yes 70810299
chr19 13954597 13954612 TFAP2C JASPAR yes 70810300
chr19 13954597 13954612 TFAP2A JASPAR yes 112537244
chr19 13954597 13954612 TFAP2C JASPAR yes 112537245
chr19 13954600 13954612 TFAP2A JASPAR yes 70810301
chr19 13954600 13954612 TFAP2B JASPAR yes 70810302
chr19 13954600 13954612 TFAP2C JASPAR yes 70810303
chr19 13954600 13954612 TFAP2A JASPAR yes 112537246
chr19 13954600 13954612 TFAP2B JASPAR yes 112537247
chr19 13954600 13954612 TFAP2C JASPAR yes 112537248
chr19 13954601 13954610 TFAP2A JASPAR yes 70810304
chr19 13954601 13954610 TFAP2A JASPAR yes 112537249
chr19 13954606 13954611 SP1 TRANSFAC yes 70810305
chr19 13954606 13954611 SP1 TRANSFAC yes 112537250
chr19 13954611 13954625 TLX1 JASPAR yes 70810306
chr19 13954611 13954625 TLX1 JASPAR yes 112537251
chr19 13954612 13954626 TLX1 JASPAR yes 70810307
chr19 13954612 13954626 TLX1 JASPAR yes 112537252
chr19 13954622 13954632 TCF4 JASPAR yes 70810308
chr19 13954622 13954632 TCF4 JASPAR yes 112537253
chr19 13954624 13954633 ZEB1 JASPAR yes 70810309
chr19 13954624 13954633 ZEB1 JASPAR yes 112537254
chr19 13954626 13954631 SP1 TRANSFAC yes 70810310
chr19 13954626 13954631 SP1 TRANSFAC yes 112537255
chr19 13954658 13954668 SP1 JASPAR yes 70810311
chr19 13954658 13954668 SP1 JASPAR yes 112537256
chr19 13954658 13954675 ESR1 JASPAR yes 70810312
chr19 13954658 13954675 ESR1 JASPAR yes 112537257
chr19 13954659 13954667 SP1 TRANSFAC yes 70810313
chr19 13954659 13954667 SP1 TRANSFAC yes 112537258
chr19 13954659 13954668 SP1 TRANSFAC yes 70810314
chr19 13954659 13954668 SP1 TRANSFAC yes 112537259
chr19 13954659 13954669 SP1 JASPAR yes 70810315
chr19 13954659 13954669 SP1 JASPAR yes 112537260
chr19 13954659 13954674 ESR2 JASPAR yes 70810316
chr19 13954659 13954674 ESR2 JASPAR yes 112537261
chr19 13954659 13954679 ESR1 JASPAR yes 70810317
chr19 13954659 13954679 ESR1 JASPAR yes 112537262
chr19 13954660 13954665 SP1 TRANSFAC yes 70810318
chr19 13954660 13954665 SP1 TRANSFAC yes 112537263
chr19 13954661 13954666 SP1 TRANSFAC yes 70810319
chr19 13954661 13954666 SP1 TRANSFAC yes 112537264
chr19 13954661 13954667 SP1 TRANSFAC yes 70810320
chr19 13954661 13954667 SP1 TRANSFAC yes 112537265
chr19 13954668 13954683 NR2C2 JASPAR yes 70810321
chr19 13954668 13954683 NR2C2 JASPAR yes 112537266
chr19 13954688 13954708 TP53 JASPAR yes 70810322
chr19 13954688 13954708 TP53 JASPAR yes 112537267
chr19 13954696 13954700 LFA1 TRANSFAC yes 70810323
chr19 13954696 13954700 LFA1 TRANSFAC yes 112537268
chr19 13954700 13954714 TLX1 JASPAR yes 70810324
chr19 13954700 13954714 TLX1 JASPAR yes 112537269
chr19 13954701 13954708 E2F1 TRANSFAC yes 70810325
chr19 13954701 13954708 E2F1 TRANSFAC yes 112537270
chr19 13954710 13954716 YY1 JASPAR yes 70810326
chr19 13954710 13954716 YY1 JASPAR yes 112537271
chr19 13954713 13954732 CTCF JASPAR yes 70810327
chr19 13954713 13954732 CTCF JASPAR yes 112537272
SNP sites on vista28718[chr19:13954357-13954714]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13954405 rs547800078 C G,T
ESR1 ESR2 H4TF2 POLR2A SP1 STAT3 TCF7L2
5452013
chr19 13954409 rs369767981 T TC
ESR1 ESR2 MZF1 POLR2A SP1 STAT3 TCF7L2
5452014
chr19 13954409 rs550054261 T TC
ESR1 ESR2 MZF1 POLR2A SP1 STAT3 TCF7L2
5452015
chr19 13954425 rs10414487 G T
POLR2A STAT1 STAT3 TCF7L2
5452016
chr19 13954535 rs8111407 T C
E2F1 E2F4 E2F6 POLR2A STAT3 TCF7L2 TFAP2C ZNF263
5452017
chr19 13954571 rs2594714 G A
POLR2A STAT3 TCF7L2 TFAP2C
5452018
chr19 13954633 rs2607276 T G
POLR2A TCF7L2 TFAP2C ZEB1
5452019
Genes possibly regulated by vista28718[chr19:13954357-13954714]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13875346 13885096 + MRI1 ENSG00000037757.9 13875346 0.63 0.99 17119 20989
chr19 13884982 13889276 + C19orf53 ENSG00000104979.4 13884982 0.58 0.99 17120 30625
chr19 13890884 13900972 - AC008686.1 ENSG00000214109.3 13900972 1.0 1.0 17121 46615
chr19 13906274 13943044 + ZSWIM4 ENSG00000132003.5 13906274 0.69 1.0 17122 51917
chr19 13972877 13991571 + NANOS3 ENSG00000187556.6 13972877 0.81 1.0 17123 81837
chr19 13993161 14017265 - C19orf57 ENSG00000132016.7 14017265 0.81 1.0 17124 37449
chr19 14017014 14041692 + CC2D1A ENSG00000132024.13 14017014 0.56 1.0 17125 37700
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28718[chr19:13954357-13954714]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results