EnhancerDB
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  3. vista28719[chr19:13955108-13955589]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28719[chr19:13955108-13955589]
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Tissue distribution of vista28719
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Transcription factor that possibly regulate vista28719[chr19:13955108-13955589]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13955109 13955130 ZNF263 JASPAR yes 70810328
chr19 13955109 13955130 ZNF263 JASPAR yes 112537326
chr19 13955117 13955122 TFAP2A TRANSFAC yes 70810329
chr19 13955117 13955122 TFAP2A TRANSFAC yes 112537327
chr19 13955117 13955123 MZF1 JASPAR yes 70810330
chr19 13955117 13955123 MZF1 JASPAR yes 112537328
chr19 13955151 13955165 GLIS2 JASPAR yes 70810331
chr19 13955151 13955165 GLIS3 JASPAR yes 70810332
chr19 13955151 13955165 GLIS2 JASPAR yes 112537329
chr19 13955151 13955165 GLIS3 JASPAR yes 112537330
chr19 13955159 13955164 SP1 TRANSFAC yes 70810333
chr19 13955159 13955164 SP1 TRANSFAC yes 112537331
chr19 13955167 13955176 TFAP2A JASPAR yes 70810334
chr19 13955167 13955176 TFAP2A JASPAR yes 112537332
chr19 13955167 13955178 EBF1 JASPAR yes 70810335
chr19 13955167 13955178 EBF1 JASPAR yes 112537333
chr19 13955171 13955176 TFAP2A TRANSFAC yes 70810336
chr19 13955171 13955176 TFAP2A TRANSFAC yes 112537334
chr19 13955171 13955177 MZF1 JASPAR yes 70810337
chr19 13955171 13955177 MZF1 JASPAR yes 112537335
chr19 13955193 13955207 PLAG1 JASPAR yes 70810338
chr19 13955193 13955207 PLAG1 JASPAR yes 112537336
chr19 13955200 13955205 SP1 TRANSFAC yes 70810339
chr19 13955200 13955205 SP1 TRANSFAC yes 112537337
chr19 13955200 13955214 PLAG1 JASPAR yes 70810340
chr19 13955200 13955214 PLAG1 JASPAR yes 112537338
chr19 13955200 13955215 HNF4G JASPAR yes 70810341
chr19 13955200 13955215 HNF4G JASPAR yes 112537339
chr19 13955201 13955216 HNF4A JASPAR yes 70810342
chr19 13955201 13955216 HNF4A JASPAR yes 112537340
chr19 13955202 13955213 EBF1 JASPAR yes 70810343
chr19 13955202 13955213 EBF1 JASPAR yes 112537341
chr19 13955202 13955215 TFAP2A JASPAR yes 70810344
chr19 13955202 13955215 TFAP2B JASPAR yes 70810345
chr19 13955202 13955215 TFAP2C JASPAR yes 70810346
chr19 13955202 13955215 TFAP2A JASPAR yes 112537342
chr19 13955202 13955215 TFAP2B JASPAR yes 112537343
chr19 13955202 13955215 TFAP2C JASPAR yes 112537344
chr19 13955204 13955224 ESR1 JASPAR yes 70810347
chr19 13955204 13955224 ESR1 JASPAR yes 112537345
chr19 13955206 13955226 PPARG JASPAR yes 70810348
chr19 13955206 13955226 PPARG JASPAR yes 112537346
chr19 13955207 13955225 ESR2 JASPAR yes 70810349
chr19 13955207 13955225 ESR2 JASPAR yes 112537347
chr19 13955208 13955225 ESR1 JASPAR yes 70810350
chr19 13955208 13955225 ESR1 JASPAR yes 112537348
chr19 13955208 13955226 ESR2 JASPAR yes 70810351
chr19 13955208 13955226 ESR2 JASPAR yes 112537349
chr19 13955209 13955224 ESR2 JASPAR yes 70810352
chr19 13955209 13955224 ESR2 JASPAR yes 112537350
chr19 13955209 13955229 ESR1 JASPAR yes 70810353
chr19 13955209 13955229 ESR1 JASPAR yes 112537351
chr19 13955210 13955214 LFA1 TRANSFAC yes 70810354
chr19 13955210 13955214 LFA1 TRANSFAC yes 112537352
chr19 13955227 13955247 TP63 JASPAR yes 70810355
chr19 13955227 13955247 TP63 JASPAR yes 112537353
chr19 13955237 13955257 TP63 JASPAR yes 70810356
chr19 13955237 13955257 TP63 JASPAR yes 112537354
chr19 13955246 13955265 CTCF JASPAR yes 70810357
chr19 13955246 13955265 CTCF JASPAR yes 112537355
chr19 13955246 13955267 ZNF263 JASPAR yes 70810358
chr19 13955246 13955267 ZNF263 JASPAR yes 112537356
chr19 13955247 13955251 LFA1 TRANSFAC yes 70810359
chr19 13955247 13955251 LFA1 TRANSFAC yes 112537357
chr19 13955257 13955261 LFA1 TRANSFAC yes 70810360
chr19 13955257 13955261 LFA1 TRANSFAC yes 112537358
chr19 13955273 13955288 TFAP2A JASPAR yes 70810361
chr19 13955273 13955288 TFAP2C JASPAR yes 70810362
chr19 13955273 13955288 TFAP2A JASPAR yes 112537359
chr19 13955273 13955288 TFAP2C JASPAR yes 112537360
chr19 13955274 13955279 SP1 TRANSFAC yes 70810363
chr19 13955274 13955279 SP1 TRANSFAC yes 112537361
chr19 13955274 13955288 PLAG1 JASPAR yes 70810364
chr19 13955274 13955288 PLAG1 JASPAR yes 112537362
chr19 13955276 13955287 EBF1 JASPAR yes 70810365
chr19 13955276 13955287 EBF1 JASPAR yes 112537363
chr19 13955276 13955288 TFAP2A JASPAR yes 70810366
chr19 13955276 13955288 TFAP2B JASPAR yes 70810367
chr19 13955276 13955288 TFAP2C JASPAR yes 70810368
chr19 13955276 13955288 TFAP2A JASPAR yes 112537364
chr19 13955276 13955288 TFAP2B JASPAR yes 112537365
chr19 13955276 13955288 TFAP2C JASPAR yes 112537366
chr19 13955276 13955290 EBF1 JASPAR yes 70810369
chr19 13955276 13955290 EBF1 JASPAR yes 112537367
chr19 13955277 13955286 TFAP2A JASPAR yes 70810370
chr19 13955277 13955286 TFAP2A JASPAR yes 112537368
chr19 13955278 13955289 EBF1 JASPAR yes 70810371
chr19 13955278 13955289 EBF1 JASPAR yes 112537369
chr19 13955284 13955289 ETS2 TRANSFAC yes 70810372
chr19 13955284 13955289 ETS2 TRANSFAC yes 112537370
chr19 13955309 13955315 MZF1 JASPAR yes 70810373
chr19 13955309 13955315 MZF1 JASPAR yes 112537371
chr19 13955321 13955326 SP1 TRANSFAC yes 70810374
chr19 13955321 13955326 SP1 TRANSFAC yes 112537372
chr19 13955327 13955342 ZIC3 JASPAR yes 70810375
chr19 13955327 13955342 ZIC3 JASPAR yes 112537373
chr19 13955334 13955342 TBX15 JASPAR yes 70810376
chr19 13955334 13955342 TBX15 JASPAR yes 112537374
chr19 13955335 13955340 SP1 TRANSFAC yes 70810377
chr19 13955335 13955340 SP1 TRANSFAC yes 112537375
chr19 13955348 13955358 MAX JASPAR yes 70810378
chr19 13955348 13955358 MAX JASPAR yes 112537376
chr19 13955348 13955359 USF2 JASPAR yes 70810379
chr19 13955348 13955359 USF2 JASPAR yes 112537377
chr19 13955383 13955393 REL JASPAR yes 70810380
chr19 13955383 13955393 REL JASPAR yes 112537378
chr19 13955383 13955394 NFKB1 JASPAR yes 70810381
chr19 13955383 13955394 NFKB1 JASPAR yes 112537379
chr19 13955386 13955390 YY1 TRANSFAC yes 70810382
chr19 13955386 13955390 YY1 TRANSFAC yes 112537380
chr19 13955393 13955399 SP1 TRANSFAC yes 70810383
chr19 13955393 13955399 SP1 TRANSFAC yes 112537381
chr19 13955394 13955399 SP1 TRANSFAC yes 70810384
chr19 13955394 13955399 SP1 TRANSFAC yes 112537382
chr19 13955395 13955400 SP1 TRANSFAC yes 70810385
chr19 13955395 13955400 SP1 TRANSFAC yes 112537383
chr19 13955396 13955410 PLAG1 JASPAR yes 70810386
chr19 13955396 13955410 PLAG1 JASPAR yes 112537384
chr19 13955399 13955419 RREB1 JASPAR yes 70810387
chr19 13955399 13955419 RREB1 JASPAR yes 112537385
chr19 13955400 13955420 RREB1 JASPAR yes 70810388
chr19 13955400 13955420 RREB1 JASPAR yes 112537386
chr19 13955401 13955421 RREB1 JASPAR yes 70810389
chr19 13955401 13955421 RREB1 JASPAR yes 112537387
chr19 13955406 13955411 SP1 TRANSFAC yes 70810390
chr19 13955406 13955411 SP1 TRANSFAC yes 112537388
chr19 13955407 13955417 ZNF740 JASPAR yes 70810391
chr19 13955407 13955417 ZNF740 JASPAR yes 112537389
chr19 13955409 13955419 SP1 JASPAR yes 70810392
chr19 13955409 13955419 SP1 JASPAR yes 112537390
chr19 13955412 13955417 SP1 TRANSFAC yes 70810393
chr19 13955412 13955417 SP1 TRANSFAC yes 112537391
chr19 13955414 13955427 NFKB1 JASPAR yes 70810394
chr19 13955414 13955427 NFKB2 JASPAR yes 70810395
chr19 13955414 13955427 NFKB1 JASPAR yes 112537392
chr19 13955414 13955427 NFKB2 JASPAR yes 112537393
chr19 13955415 13955426 NFKB1 JASPAR yes 70810396
chr19 13955415 13955426 NFKB1 JASPAR yes 112537394
chr19 13955459 13955470 CEBPA JASPAR yes 70810397
chr19 13955459 13955470 CEBPA JASPAR yes 112537395
chr19 13955464 13955479 PRDM1 JASPAR yes 70810398
chr19 13955464 13955479 STAT2 JASPAR yes 70810399
chr19 13955464 13955479 PRDM1 JASPAR yes 112537396
chr19 13955464 13955479 STAT2 JASPAR yes 112537397
chr19 13955475 13955489 RORA JASPAR yes 70810400
chr19 13955475 13955489 RORA JASPAR yes 112537398
chr19 13955476 13955487 PHOX2A JASPAR yes 70810401
chr19 13955476 13955487 PHOX2A JASPAR yes 112537399
chr19 13955487 13955502 FOXP1 JASPAR yes 70810402
chr19 13955487 13955502 FOXP1 JASPAR yes 112537400
chr19 13955519 13955525 MZF1 JASPAR yes 70810403
chr19 13955519 13955525 MZF1 JASPAR yes 112537401
chr19 13955531 13955541 MZF1 JASPAR yes 70810404
chr19 13955531 13955541 MZF1 JASPAR yes 112537402
chr19 13955534 13955540 SP1 TRANSFAC yes 70810405
chr19 13955534 13955540 SP1 TRANSFAC yes 112537403
chr19 13955550 13955560 SREBF2 JASPAR yes 70810406
chr19 13955550 13955560 SREBF2 JASPAR yes 112537404
chr19 13955550 13955567 ZNF410 JASPAR yes 70810407
chr19 13955550 13955567 ZNF410 JASPAR yes 112537405
chr19 13955586 13955590 NFE TRANSFAC yes 70810408
chr19 13955586 13955590 NFE TRANSFAC yes 112537406
chr19 13955586 13955600 BATF3 JASPAR yes 70810409
chr19 13955586 13955600 BATF3 JASPAR yes 112537407
SNP sites on vista28719[chr19:13955108-13955589]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13955161 rs12162265 G A
GLIS2 GLIS3 POLR2A SP1
5452027
chr19 13955444 rs200544224 CACAG C
POLR2A
5452028
chr19 13955464 rs568243800 CA C
CEBPA POLR2A PRDM1 STAT2
5452029
chr19 13955506 rs62122067 G A
POLR2A
5452030
chr19 13955516 rs76616960 C T
POLR2A
5452031
Genes possibly regulated by vista28719[chr19:13955108-13955589]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13875346 13885096 + MRI1 ENSG00000037757.9 13875346 0.63 0.99 17119 20238
chr19 13884982 13889276 + C19orf53 ENSG00000104979.4 13884982 0.58 0.99 17120 29874
chr19 13890884 13900972 - AC008686.1 ENSG00000214109.3 13900972 1.0 1.0 17121 45864
chr19 13906274 13943044 + ZSWIM4 ENSG00000132003.5 13906274 0.69 1.0 17122 51166
chr19 13972877 13991571 + NANOS3 ENSG00000187556.6 13972877 0.81 1.0 17123 82712
chr19 13993161 14017265 - C19orf57 ENSG00000132016.7 14017265 0.81 1.0 17124 38324
chr19 14017014 14041692 + CC2D1A ENSG00000132024.13 14017014 0.56 1.0 17125 38575
Expression level of Genes
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miRNAs possibly regulated by vista28719[chr19:13955108-13955589]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results