EnhancerDB
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  3. rs200544224[chr19:13955444]
Enhancers that have rs200544224[chr19:13955444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13955108 13955589 vista28719
VISTA
Transcript factors that have rs200544224[chr19:13955444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13954960 13955635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852218
chr19 13954960 13955635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390163
chr19 13954976 13955506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852219
chr19 13954976 13955506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390164
chr19 13954995 13955499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852222
chr19 13954995 13955499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390167
chr19 13955039 13955503 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852225
chr19 13955039 13955503 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390170
chr19 13955042 13955446 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852226
chr19 13955042 13955446 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390171
chr19 13955066 13955502 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852228
chr19 13955066 13955502 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390173
chr19 13955121 13955517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852230
chr19 13955121 13955517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390175
chr19 13955123 13955523 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852231
chr19 13955123 13955523 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390176
chr19 13955136 13955492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852234
chr19 13955136 13955492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390179
chr19 13955153 13955513 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852237
chr19 13955153 13955513 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390182
chr19 13955200 13955570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852239
chr19 13955200 13955570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390184
chr19 13955237 13955567 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852240
chr19 13955237 13955567 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390185
chr19 13955336 13955600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852241
chr19 13955336 13955600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390186
chr19 13955437 13955793 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852242
chr19 13955437 13955793 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390187
chr19 13955441 13956851 ZNF143 GTRD no Epithelial (MCF-7) 21852243
chr19 13955441 13956851 ZNF143 GTRD no Epithelial (MCF-7) 108390188
Genes associated with rs200544224[chr19:13955444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More