EnhancerDB
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  3. vista2878[chr1:110418068-110418377]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2878[chr1:110418068-110418377]
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Tissue distribution of vista2878
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Transcription factor that possibly regulate vista2878[chr1:110418068-110418377]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110418087 110418091 NFE TRANSFAC yes 31448470
chr1 110418087 110418091 NFE TRANSFAC yes 118348095
chr1 110418087 110418092 GATA1 TRANSFAC yes 31448471
chr1 110418087 110418092 GATA1 TRANSFAC yes 118348096
chr1 110418087 110418093 GATA3 JASPAR yes 31448472
chr1 110418087 110418093 GATA3 JASPAR yes 118348097
chr1 110418091 110418112 ZNF263 JASPAR yes 31448473
chr1 110418091 110418112 ZNF263 JASPAR yes 118348098
chr1 110418111 110418114 MYB TRANSFAC yes 31448474
chr1 110418111 110418114 MYB TRANSFAC yes 118348099
chr1 110418116 110418119 MYB TRANSFAC yes 31448475
chr1 110418116 110418119 MYB TRANSFAC yes 118348100
chr1 110418118 110418129 HOXC12 JASPAR yes 31448476
chr1 110418118 110418129 HOXC13 JASPAR yes 31448477
chr1 110418118 110418129 HOXC12 JASPAR yes 118348101
chr1 110418118 110418129 HOXC13 JASPAR yes 118348102
chr1 110418160 110418170 HMBOX1 JASPAR yes 31448478
chr1 110418160 110418170 HMBOX1 JASPAR yes 118348103
chr1 110418166 110418187 IRF1 JASPAR yes 31448479
chr1 110418166 110418187 IRF1 JASPAR yes 118348104
chr1 110418185 110418189 YY1 TRANSFAC yes 31448480
chr1 110418185 110418189 YY1 TRANSFAC yes 118348105
chr1 110418185 110418196 CEBPA JASPAR yes 31448481
chr1 110418185 110418196 CEBPA JASPAR yes 118348106
chr1 110418186 110418196 CEBPD JASPAR yes 31448482
chr1 110418186 110418196 CEBPD JASPAR yes 118348107
chr1 110418187 110418198 NFIL3 JASPAR yes 31448483
chr1 110418187 110418198 NFIL3 JASPAR yes 118348108
chr1 110418190 110418200 MEOX2 JASPAR yes 31448484
chr1 110418190 110418200 MEOX2 JASPAR yes 118348109
chr1 110418190 110418205 HNF1A JASPAR yes 31448485
chr1 110418190 110418205 HNF1A JASPAR yes 118348110
chr1 110418191 110418205 POU4F1 JASPAR yes 31448486
chr1 110418191 110418205 POU4F1 JASPAR yes 118348111
chr1 110418191 110418207 POU4F2 JASPAR yes 31448487
chr1 110418191 110418207 POU4F3 JASPAR yes 31448488
chr1 110418191 110418207 POU4F2 JASPAR yes 118348112
chr1 110418191 110418207 POU4F3 JASPAR yes 118348113
chr1 110418193 110418207 POU4F1 JASPAR yes 31448489
chr1 110418193 110418207 POU4F1 JASPAR yes 118348114
chr1 110418195 110418206 PHOX2A JASPAR yes 31448490
chr1 110418195 110418206 PROP1 JASPAR yes 31448491
chr1 110418195 110418206 PHOX2A JASPAR yes 118348115
chr1 110418195 110418206 PROP1 JASPAR yes 118348116
chr1 110418195 110418211 POU4F2 JASPAR yes 31448492
chr1 110418195 110418211 POU4F3 JASPAR yes 31448493
chr1 110418195 110418211 POU4F2 JASPAR yes 118348117
chr1 110418195 110418211 POU4F3 JASPAR yes 118348118
chr1 110418196 110418200 YY1 TRANSFAC yes 31448494
chr1 110418196 110418200 YY1 TRANSFAC yes 118348119
chr1 110418197 110418208 HOXA10 JASPAR yes 31448495
chr1 110418197 110418208 HOXA10 JASPAR yes 118348120
chr1 110418197 110418211 POU4F1 JASPAR yes 31448496
chr1 110418197 110418211 POU4F1 JASPAR yes 118348121
chr1 110418197 110418212 HNF1A JASPAR yes 31448497
chr1 110418197 110418212 HNF1A JASPAR yes 118348122
chr1 110418198 110418208 GSX2 JASPAR yes 31448498
chr1 110418198 110418208 HOXB2 JASPAR yes 31448499
chr1 110418198 110418208 HOXB3 JASPAR yes 31448500
chr1 110418198 110418208 MNX1 JASPAR yes 31448501
chr1 110418198 110418208 POU6F1 JASPAR yes 31448502
chr1 110418198 110418208 GSX2 JASPAR yes 118348123
chr1 110418198 110418208 HOXB2 JASPAR yes 118348124
chr1 110418198 110418208 HOXB3 JASPAR yes 118348125
chr1 110418198 110418208 MNX1 JASPAR yes 118348126
chr1 110418198 110418208 POU6F1 JASPAR yes 118348127
chr1 110418198 110418211 HNF1B JASPAR yes 31448503
chr1 110418198 110418211 HNF1B JASPAR yes 118348128
chr1 110418199 110418207 LMX1A JASPAR yes 31448504
chr1 110418199 110418207 LMX1B JASPAR yes 31448505
chr1 110418199 110418207 NKX6-1 JASPAR yes 31448506
chr1 110418199 110418207 NKX6-2 JASPAR yes 31448507
chr1 110418199 110418207 VAX1 JASPAR yes 31448508
chr1 110418199 110418207 VAX2 JASPAR yes 31448509
chr1 110418199 110418207 VSX1 JASPAR yes 31448510
chr1 110418199 110418207 VSX2 JASPAR yes 31448511
chr1 110418199 110418207 LMX1A JASPAR yes 118348129
chr1 110418199 110418207 LMX1B JASPAR yes 118348130
chr1 110418199 110418207 NKX6-1 JASPAR yes 118348131
chr1 110418199 110418207 NKX6-2 JASPAR yes 118348132
chr1 110418199 110418207 VAX1 JASPAR yes 118348133
chr1 110418199 110418207 VAX2 JASPAR yes 118348134
chr1 110418199 110418207 VSX1 JASPAR yes 118348135
chr1 110418199 110418207 VSX2 JASPAR yes 118348136
chr1 110418202 110418214 FOXC2 JASPAR yes 31448512
chr1 110418202 110418214 FOXC2 JASPAR yes 118348137
chr1 110418202 110418215 POU2F2 JASPAR yes 31448513
chr1 110418202 110418215 POU2F2 JASPAR yes 118348138
chr1 110418202 110418216 POU1F1 JASPAR yes 31448514
chr1 110418202 110418216 POU1F1 JASPAR yes 118348139
chr1 110418203 110418214 FOXB1 JASPAR yes 31448515
chr1 110418203 110418214 FOXC1 JASPAR yes 31448516
chr1 110418203 110418214 FOXB1 JASPAR yes 118348140
chr1 110418203 110418214 FOXC1 JASPAR yes 118348141
chr1 110418203 110418215 POU3F1 JASPAR yes 31448517
chr1 110418203 110418215 POU3F2 JASPAR yes 31448518
chr1 110418203 110418215 POU3F1 JASPAR yes 118348142
chr1 110418203 110418215 POU3F2 JASPAR yes 118348143
chr1 110418203 110418216 POU3F3 JASPAR yes 31448519
chr1 110418203 110418216 POU3F3 JASPAR yes 118348144
chr1 110418204 110418208 YY1 TRANSFAC yes 31448520
chr1 110418204 110418208 YY1 TRANSFAC yes 118348145
chr1 110418204 110418216 POU2F1 JASPAR yes 31448521
chr1 110418204 110418216 POU2F1 JASPAR yes 118348146
chr1 110418205 110418214 POU5F1B JASPAR yes 31448522
chr1 110418205 110418214 POU5F1B JASPAR yes 118348147
chr1 110418215 110418220 ETS2 TRANSFAC yes 31448523
chr1 110418215 110418220 ETS2 TRANSFAC yes 118348148
chr1 110418220 110418230 NFATC3 JASPAR yes 31448524
chr1 110418220 110418230 NFATC3 JASPAR yes 118348149
chr1 110418221 110418239 NR3C1 JASPAR yes 31448525
chr1 110418221 110418239 NR3C1 JASPAR yes 118348150
chr1 110418222 110418229 NFATC2 JASPAR yes 31448526
chr1 110418222 110418229 NFATC2 JASPAR yes 118348151
chr1 110418228 110418243 FOXP1 JASPAR yes 31448527
chr1 110418228 110418243 FOXP1 JASPAR yes 118348152
chr1 110418237 110418249 FOXC2 JASPAR yes 31448528
chr1 110418237 110418249 FOXC2 JASPAR yes 118348153
chr1 110418238 110418249 FOXC1 JASPAR yes 31448529
chr1 110418238 110418249 FOXC1 JASPAR yes 118348154
chr1 110418239 110418243 YY1 TRANSFAC yes 31448530
chr1 110418239 110418243 YY1 TRANSFAC yes 118348155
chr1 110418258 110418278 RREB1 JASPAR yes 31448531
chr1 110418258 110418278 RREB1 JASPAR yes 118348156
chr1 110418265 110418271 TCF4 TRANSFAC yes 31448532
chr1 110418265 110418271 TCF4 TRANSFAC yes 118348157
chr1 110418265 110418280 FOXP1 JASPAR yes 31448533
chr1 110418265 110418280 FOXP1 JASPAR yes 118348158
chr1 110418266 110418278 FOXC2 JASPAR yes 31448534
chr1 110418266 110418278 FOXC2 JASPAR yes 118348159
chr1 110418268 110418279 FOXA1 JASPAR yes 31448535
chr1 110418268 110418279 FOXA1 JASPAR yes 118348160
chr1 110418321 110418342 IRF1 JASPAR yes 31448536
chr1 110418321 110418342 IRF1 JASPAR yes 118348161
chr1 110418324 110418328 H1TF2 TRANSFAC yes 31448537
chr1 110418324 110418328 NFE TRANSFAC yes 31448538
chr1 110418324 110418328 SRF TRANSFAC yes 31448539
chr1 110418324 110418328 H1TF2 TRANSFAC yes 118348162
chr1 110418324 110418328 NFE TRANSFAC yes 118348163
chr1 110418324 110418328 SRF TRANSFAC yes 118348164
chr1 110418326 110418344 IRF2 JASPAR yes 31448540
chr1 110418326 110418344 IRF2 JASPAR yes 118348165
chr1 110418327 110418348 IRF1 JASPAR yes 31448541
chr1 110418327 110418348 IRF1 JASPAR yes 118348166
chr1 110418328 110418349 ZNF263 JASPAR yes 31448542
chr1 110418328 110418349 ZNF263 JASPAR yes 118348167
chr1 110418329 110418344 PRDM1 JASPAR yes 31448543
chr1 110418329 110418344 STAT2 JASPAR yes 31448544
chr1 110418329 110418344 PRDM1 JASPAR yes 118348168
chr1 110418329 110418344 STAT2 JASPAR yes 118348169
chr1 110418330 110418344 STAT1 JASPAR yes 31448545
chr1 110418330 110418344 STAT1 JASPAR yes 118348170
chr1 110418366 110418370 NFE TRANSFAC yes 31448546
chr1 110418366 110418370 NFE TRANSFAC yes 118348171
SNP sites on vista2878[chr1:110418068-110418377]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110418083 rs78057504 C A no 549156
chr1 110418085 rs374567301 T C no 549157
chr1 110418161 rs66827018 CTTAG C
HMBOX1
549158
chr1 110418161 rs74262721 CTTAG C
HMBOX1
549159
chr1 110418192 rs140624092 G A
CEBPA CEBPD HNF1A MEOX2 NFIL3 POU4F1 POU4F2 POU4F3
549160
chr1 110418267 rs560384177 T TTTGTTTGC
FOXC2 FOXP1 RREB1 TCF4
549161
chr1 110418297 rs571671272 C G no 549162
Genes possibly regulated by vista2878[chr1:110418068-110418377]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110452864 110473614 + CSF1 ENSG00000184371.9 110452864 0.71 0.98 991 65513
Expression level of Genes
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miRNAs possibly regulated by vista2878[chr1:110418068-110418377]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results