EnhancerDB
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  3. rs560384177[chr1:110418267]
Enhancers that have rs560384177[chr1:110418267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 110418068 110418377 vista2878
VISTA
Transcript factors that have rs560384177[chr1:110418267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110418258 110418278 RREB1 JASPAR yes 31448531
chr1 110418258 110418278 RREB1 JASPAR yes 118348156
chr1 110418265 110418271 TCF4 TRANSFAC yes 31448532
chr1 110418265 110418271 TCF4 TRANSFAC yes 118348157
chr1 110418265 110418280 FOXP1 JASPAR yes 31448533
chr1 110418265 110418280 FOXP1 JASPAR yes 118348158
chr1 110418266 110418278 FOXC2 JASPAR yes 31448534
chr1 110418266 110418278 FOXC2 JASPAR yes 118348159
Genes associated with rs560384177[chr1:110418267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More