EnhancerDB
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  3. vista2883[chr1:110439976-110440401]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2883[chr1:110439976-110440401]
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Tissue distribution of vista2883
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Transcription factor that possibly regulate vista2883[chr1:110439976-110440401]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110439967 110439988 IRF1 JASPAR yes 31451508
chr1 110439967 110439988 IRF1 JASPAR yes 118348441
chr1 110439971 110439985 SPI1 JASPAR yes 31451510
chr1 110439971 110439985 SPI1 JASPAR yes 118348442
chr1 110440012 110440017 H4TF1 TRANSFAC yes 31451511
chr1 110440012 110440017 H4TF1 TRANSFAC yes 118348443
chr1 110440014 110440033 REST JASPAR yes 31451512
chr1 110440014 110440033 REST JASPAR yes 118348444
chr1 110440026 110440031 MYC TRANSFAC yes 31451513
chr1 110440026 110440031 MYC TRANSFAC yes 118348445
chr1 110440069 110440079 BARHL2 JASPAR yes 31451514
chr1 110440069 110440079 BARHL2 JASPAR yes 118348446
chr1 110440095 110440101 TCF4 TRANSFAC yes 31451515
chr1 110440095 110440101 TCF4 TRANSFAC yes 118348447
chr1 110440108 110440120 CREB1 JASPAR yes 31451516
chr1 110440108 110440120 CREB1 JASPAR yes 118348448
chr1 110440113 110440118 ATF1 TRANSFAC yes 31451517
chr1 110440113 110440118 ATF1 TRANSFAC yes 118348449
chr1 110440126 110440138 JDP2 JASPAR yes 31451518
chr1 110440126 110440138 JDP2 JASPAR yes 118348450
chr1 110440126 110440141 JUND JASPAR yes 31451519
chr1 110440126 110440141 JUND JASPAR yes 118348451
chr1 110440127 110440140 JUN JASPAR yes 31451520
chr1 110440127 110440140 JUN JASPAR yes 118348452
chr1 110440128 110440135 JUN TRANSFAC yes 31451521
chr1 110440128 110440135 JUN TRANSFAC yes 118348453
chr1 110440136 110440140 NFE TRANSFAC yes 31451522
chr1 110440136 110440140 NFE TRANSFAC yes 118348454
chr1 110440185 110440189 YY1 TRANSFAC yes 31451523
chr1 110440185 110440189 YY1 TRANSFAC yes 118348455
chr1 110440186 110440207 IRF1 JASPAR yes 31451524
chr1 110440186 110440207 IRF1 JASPAR yes 118348456
chr1 110440198 110440203 ETS2 TRANSFAC yes 31451525
chr1 110440198 110440203 ETS2 TRANSFAC yes 118348457
chr1 110440199 110440214 FOXA1 JASPAR yes 31451526
chr1 110440199 110440214 FOXA1 JASPAR yes 118348458
chr1 110440200 110440212 FOXI1 JASPAR yes 31451527
chr1 110440200 110440212 FOXI1 JASPAR yes 118348459
chr1 110440200 110440215 FOXP1 JASPAR yes 31451528
chr1 110440200 110440215 FOXP1 JASPAR yes 118348460
chr1 110440201 110440212 FOXP2 JASPAR yes 31451529
chr1 110440201 110440212 FOXP2 JASPAR yes 118348461
chr1 110440201 110440213 FOXC2 JASPAR yes 31451530
chr1 110440201 110440213 FOXC2 JASPAR yes 118348462
chr1 110440201 110440215 FOXF2 JASPAR yes 31451531
chr1 110440201 110440215 FOXF2 JASPAR yes 118348463
chr1 110440202 110440210 FOXG1 JASPAR yes 31451532
chr1 110440202 110440210 FOXO3 JASPAR yes 31451533
chr1 110440202 110440210 FOXG1 JASPAR yes 118348464
chr1 110440202 110440210 FOXO3 JASPAR yes 118348465
chr1 110440202 110440213 FOXB1 JASPAR yes 31451534
chr1 110440202 110440213 FOXC1 JASPAR yes 31451535
chr1 110440202 110440213 FOXB1 JASPAR yes 118348466
chr1 110440202 110440213 FOXC1 JASPAR yes 118348467
chr1 110440203 110440214 FOXA1 JASPAR yes 31451536
chr1 110440203 110440214 FOXA1 JASPAR yes 118348468
chr1 110440203 110440218 MEF2A JASPAR yes 31451537
chr1 110440203 110440218 MEF2A JASPAR yes 118348469
chr1 110440204 110440219 MEF2C JASPAR yes 31451538
chr1 110440204 110440219 MEF2C JASPAR yes 118348470
chr1 110440207 110440211 YY1 TRANSFAC yes 31451539
chr1 110440207 110440211 YY1 TRANSFAC yes 118348471
chr1 110440220 110440226 YY1 JASPAR yes 31451540
chr1 110440220 110440226 YY1 JASPAR yes 118348472
chr1 110440232 110440243 NFKB1 JASPAR yes 31451541
chr1 110440232 110440243 NFKB1 JASPAR yes 118348473
chr1 110440278 110440283 GATA2 JASPAR yes 31451542
chr1 110440278 110440283 GATA2 JASPAR yes 118348474
chr1 110440280 110440286 MZF1 JASPAR yes 31451543
chr1 110440280 110440286 MZF1 JASPAR yes 118348475
chr1 110440282 110440303 REST JASPAR yes 31451544
chr1 110440282 110440303 REST JASPAR yes 118348476
chr1 110440283 110440302 REST JASPAR yes 31451545
chr1 110440283 110440302 REST JASPAR yes 118348477
chr1 110440322 110440334 FOXI1 JASPAR yes 31451546
chr1 110440322 110440334 FOXI1 JASPAR yes 118348478
chr1 110440325 110440329 YY1 TRANSFAC yes 31451547
chr1 110440325 110440329 YY1 TRANSFAC yes 118348479
chr1 110440342 110440356 POU4F1 JASPAR yes 31451548
chr1 110440342 110440356 POU4F1 JASPAR yes 118348480
chr1 110440342 110440358 POU4F3 JASPAR yes 31451549
chr1 110440342 110440358 POU4F3 JASPAR yes 118348481
chr1 110440357 110440360 MYB TRANSFAC yes 31451550
chr1 110440357 110440360 MYB TRANSFAC yes 118348482
chr1 110440387 110440394 NKX3-1 JASPAR yes 31451551
chr1 110440387 110440394 NKX3-1 JASPAR yes 118348483
chr1 110440392 110440396 YY1 TRANSFAC yes 31451552
chr1 110440392 110440396 YY1 TRANSFAC yes 118348484
SNP sites on vista2883[chr1:110439976-110440401]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110440099 rs542393279 T C
TCF4
549459
chr1 110440117 rs333962 C T
ATF1 CREB1
549460
chr1 110440161 rs115873891 T C no 549461
chr1 110440168 rs143453056 G A no 549462
chr1 110440195 rs564353701 T C
IRF1
549463
chr1 110440315 rs187566468 A T no 549464
chr1 110440356 rs78261264 G T
POU4F1 POU4F3
549465
Genes possibly regulated by vista2883[chr1:110439976-110440401]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110452864 110473614 + CSF1 ENSG00000184371.9 110452864 0.71 0.98 991 87537
chr1 110527308 110566357 + AHCYL1 ENSG00000168710.13 110527308 0.71 1.0 992 13093
Expression level of Genes
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miRNAs possibly regulated by vista2883[chr1:110439976-110440401]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results