EnhancerDB
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  3. rs542393279[chr1:110440099]
Enhancers that have rs542393279[chr1:110440099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 110439976 110440401 vista2883
VISTA
Transcript factors that have rs542393279[chr1:110440099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110438467 110440483 ZNF274 GTRD no Bone Marrow (K562) 21328407
chr1 110438467 110440483 ZNF274 GTRD no Bone Marrow (K562) 107820580
chr1 110438467 110440483 ZNF274 GTRD no Bone Marrow (K562) 107820581
chr1 110440045 110440641 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107820646
chr1 110440095 110440101 TCF4 TRANSFAC yes 31451515
chr1 110440095 110440101 TCF4 TRANSFAC yes 118348447
Genes associated with rs542393279[chr1:110440099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More