EnhancerDB
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  3. vista2885[chr1:110444415-110444738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2885[chr1:110444415-110444738]
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Tissue distribution of vista2885
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Transcription factor that possibly regulate vista2885[chr1:110444415-110444738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110444339 110444699 JUND UCSC Txn Factor no Conserved 107820664
chr1 110444349 110444690 JUN UCSC Txn Factor no Conserved 107820666
chr1 110444423 110444629 USF1 UCSC Txn Factor no Conserved 107820678
chr1 110444476 110444585 USF2 UCSC Txn Factor no Conserved 107820680
chr1 110444405 110444415 SMAD3 JASPAR yes 31452142
chr1 110444405 110444415 SMAD3 JASPAR yes 118348510
chr1 110444448 110444455 MEIS1 JASPAR yes 31452143
chr1 110444448 110444455 MEIS1 JASPAR yes 118348511
chr1 110444448 110444456 MEIS2 JASPAR yes 31452144
chr1 110444448 110444456 MEIS2 JASPAR yes 118348512
chr1 110444476 110444490 TLX1 JASPAR yes 31452145
chr1 110444476 110444490 TLX1 JASPAR yes 118348513
chr1 110444477 110444491 TLX1 JASPAR yes 31452146
chr1 110444477 110444491 TLX1 JASPAR yes 118348514
chr1 110444486 110444504 RARA JASPAR yes 31452147
chr1 110444486 110444504 RARA JASPAR yes 118348515
chr1 110444490 110444504 RXRG JASPAR yes 31452148
chr1 110444490 110444504 RXRG JASPAR yes 118348516
chr1 110444493 110444506 NR2F1 JASPAR yes 31452149
chr1 110444493 110444506 NR2F1 JASPAR yes 118348517
chr1 110444494 110444508 ATF7 JASPAR yes 31452150
chr1 110444494 110444508 ATF7 JASPAR yes 118348518
chr1 110444495 110444507 JDP2 JASPAR yes 31452151
chr1 110444495 110444507 JDP2 JASPAR yes 118348519
chr1 110444495 110444510 JUND JASPAR yes 31452152
chr1 110444495 110444510 JUND JASPAR yes 118348520
chr1 110444496 110444509 JUN JASPAR yes 31452153
chr1 110444496 110444509 JUN JASPAR yes 118348521
chr1 110444497 110444505 CREB1 JASPAR yes 31452154
chr1 110444497 110444505 CREB1 JASPAR yes 118348522
chr1 110444507 110444522 HNF4G JASPAR yes 31452155
chr1 110444507 110444522 HNF4G JASPAR yes 118348523
chr1 110444524 110444540 T JASPAR yes 31452156
chr1 110444524 110444540 T JASPAR yes 118348524
chr1 110444529 110444539 TFEB JASPAR yes 31452157
chr1 110444529 110444539 TFEC JASPAR yes 31452158
chr1 110444529 110444539 TFEB JASPAR yes 118348525
chr1 110444529 110444539 TFEC JASPAR yes 118348526
chr1 110444529 110444540 USF1 JASPAR yes 31452159
chr1 110444529 110444540 USF2 JASPAR yes 31452160
chr1 110444529 110444540 USF1 JASPAR yes 118348527
chr1 110444529 110444540 USF2 JASPAR yes 118348528
chr1 110444534 110444545 NFE2L2 JASPAR yes 31452161
chr1 110444534 110444545 NFE2L2 JASPAR yes 118348529
chr1 110444568 110444582 TCF7L2 JASPAR yes 31452162
chr1 110444568 110444582 TCF7L2 JASPAR yes 118348530
chr1 110444568 110444583 LEF1 JASPAR yes 31452163
chr1 110444568 110444583 LEF1 JASPAR yes 118348531
chr1 110444572 110444578 TCF4 TRANSFAC yes 31452164
chr1 110444572 110444578 TCF4 TRANSFAC yes 118348532
chr1 110444602 110444608 MAZ TRANSFAC yes 31452165
chr1 110444602 110444608 MAZ TRANSFAC yes 118348533
chr1 110444602 110444613 E2F6 JASPAR yes 31452166
chr1 110444602 110444613 E2F6 JASPAR yes 118348534
chr1 110444603 110444618 NR2C2 JASPAR yes 31452167
chr1 110444603 110444618 NR2C2 JASPAR yes 118348535
chr1 110444604 110444618 RXRB JASPAR yes 31452168
chr1 110444604 110444618 RXRG JASPAR yes 31452169
chr1 110444604 110444618 RXRB JASPAR yes 118348536
chr1 110444604 110444618 RXRG JASPAR yes 118348537
chr1 110444630 110444645 HSF1 JASPAR yes 31452170
chr1 110444630 110444645 HSF1 JASPAR yes 118348538
chr1 110444631 110444644 HSF1 JASPAR yes 31452171
chr1 110444631 110444644 HSF2 JASPAR yes 31452172
chr1 110444631 110444644 HSF4 JASPAR yes 31452173
chr1 110444631 110444644 HSF1 JASPAR yes 118348539
chr1 110444631 110444644 HSF2 JASPAR yes 118348540
chr1 110444631 110444644 HSF4 JASPAR yes 118348541
chr1 110444642 110444653 HOXD12 JASPAR yes 31452174
chr1 110444642 110444653 HOXD12 JASPAR yes 118348542
chr1 110444684 110444690 SOX10 JASPAR yes 31452175
chr1 110444684 110444690 SOX10 JASPAR yes 118348543
chr1 110444706 110444718 SRF JASPAR yes 31452176
chr1 110444706 110444718 SRF JASPAR yes 118348544
chr1 110444724 110444738 GATA2 JASPAR yes 31452177
chr1 110444724 110444738 TCF7L2 JASPAR yes 31452178
chr1 110444724 110444738 GATA2 JASPAR yes 118348545
chr1 110444724 110444738 TCF7L2 JASPAR yes 118348546
chr1 110444724 110444739 LEF1 JASPAR yes 31452179
chr1 110444724 110444739 LEF1 JASPAR yes 118348547
chr1 110444726 110444734 GATA3 JASPAR yes 31452180
chr1 110444726 110444734 GATA3 JASPAR yes 118348548
chr1 110444735 110444739 NFE TRANSFAC yes 31452181
chr1 110444735 110444739 NFE TRANSFAC yes 118348549
chr1 110444735 110444740 GATA1 TRANSFAC yes 31452182
chr1 110444735 110444740 GATA1 TRANSFAC yes 118348550
chr1 110444735 110444741 GATA3 JASPAR yes 31452183
chr1 110444735 110444741 GATA3 JASPAR yes 118348551
SNP sites on vista2885[chr1:110444415-110444738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110444653 rs542923425 TC T
HOXD12 JUN JUND
549521
Genes possibly regulated by vista2885[chr1:110444415-110444738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110452864 110473614 + CSF1 ENSG00000184371.9 110452864 0.71 0.98 991 91874
chr1 110527308 110566357 + AHCYL1 ENSG00000168710.13 110527308 0.71 1.0 992 17430
Expression level of Genes
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miRNAs possibly regulated by vista2885[chr1:110444415-110444738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results