EnhancerDB
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Enhancers that have rs542923425[chr1:110444653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 110444415 110444738 vista2885
VISTA
Transcript factors that have rs542923425[chr1:110444653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110444084 110444660 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328499
chr1 110444084 110444660 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820657
chr1 110444317 110444653 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328500
chr1 110444317 110444653 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820658
chr1 110444317 110444681 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328501
chr1 110444317 110444681 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820659
chr1 110444323 110444719 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328502
chr1 110444323 110444719 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820660
chr1 110444332 110444728 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328504
chr1 110444332 110444728 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820662
chr1 110444339 110444661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328505
chr1 110444339 110444661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820663
chr1 110444339 110444699 JUND UCSC Txn Factor no Conserved 107820664
chr1 110444344 110444714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328506
chr1 110444344 110444714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820665
chr1 110444349 110444690 JUN UCSC Txn Factor no Conserved 107820666
chr1 110444350 110444690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328507
chr1 110444350 110444690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820667
chr1 110444355 110444679 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328508
chr1 110444355 110444679 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820668
chr1 110444366 110444676 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328509
chr1 110444366 110444676 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820669
chr1 110444379 110444699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328512
chr1 110444379 110444699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820672
chr1 110444409 110444665 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328514
chr1 110444409 110444665 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820674
chr1 110444642 110444653 HOXD12 JASPAR yes 31452174
chr1 110444642 110444653 HOXD12 JASPAR yes 118348542
Genes associated with rs542923425[chr1:110444653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More