EnhancerDB
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  3. vista3031[chr1:115873164-115873576]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3031[chr1:115873164-115873576]
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Tissue distribution of vista3031
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Transcription factor that possibly regulate vista3031[chr1:115873164-115873576]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115873019 115873479 CTCF UCSC Txn Factor no Conserved 107823608
chr1 115873155 115873166 SPDEF JASPAR yes 31729208
chr1 115873155 115873166 SPDEF JASPAR yes 118355429
chr1 115873166 115873177 PHOX2A JASPAR yes 31729209
chr1 115873166 115873177 PHOX2A JASPAR yes 118355430
chr1 115873171 115873182 DUX4 JASPAR yes 31729210
chr1 115873171 115873182 DUX4 JASPAR yes 118355431
chr1 115873215 115873220 H4TF1 TRANSFAC yes 31729211
chr1 115873215 115873220 H4TF1 TRANSFAC yes 118355432
chr1 115873218 115873232 PAX6 JASPAR yes 31729212
chr1 115873218 115873232 PAX6 JASPAR yes 118355433
chr1 115873229 115873235 TCF4 TRANSFAC yes 31729213
chr1 115873229 115873235 TCF4 TRANSFAC yes 118355434
chr1 115873247 115873251 LFA1 TRANSFAC yes 31729214
chr1 115873247 115873251 LFA1 TRANSFAC yes 118355435
chr1 115873265 115873271 JUN TRANSFAC yes 31729215
chr1 115873265 115873271 JUN TRANSFAC yes 118355436
chr1 115873270 115873284 RORA JASPAR yes 31729216
chr1 115873270 115873284 RORA JASPAR yes 118355437
chr1 115873272 115873276 YY1 TRANSFAC yes 31729217
chr1 115873272 115873276 YY1 TRANSFAC yes 118355438
chr1 115873273 115873283 RORA JASPAR yes 31729218
chr1 115873273 115873283 RORA JASPAR yes 118355439
chr1 115873275 115873292 BCL6B JASPAR yes 31729219
chr1 115873275 115873292 BCL6B JASPAR yes 118355440
chr1 115873277 115873294 RARA JASPAR yes 31729220
chr1 115873277 115873294 RXRA JASPAR yes 31729221
chr1 115873277 115873294 RARA JASPAR yes 118355441
chr1 115873277 115873294 RXRA JASPAR yes 118355442
chr1 115873278 115873282 ESR1 TRANSFAC yes 31729222
chr1 115873278 115873282 ESR1 TRANSFAC yes 118355443
chr1 115873278 115873293 PRDM1 JASPAR yes 31729223
chr1 115873278 115873293 PRDM1 JASPAR yes 118355444
chr1 115873281 115873291 NFATC3 JASPAR yes 31729224
chr1 115873281 115873291 NFATC3 JASPAR yes 118355445
chr1 115873284 115873302 IRF2 JASPAR yes 31729225
chr1 115873284 115873302 IRF2 JASPAR yes 118355446
chr1 115873298 115873309 USF1 JASPAR yes 31729226
chr1 115873298 115873309 USF1 JASPAR yes 118355447
chr1 115873299 115873310 USF2 JASPAR yes 31729227
chr1 115873299 115873310 USF2 JASPAR yes 118355448
chr1 115873302 115873313 FOSL2 JASPAR yes 31729228
chr1 115873302 115873313 FOSL2 JASPAR yes 118355449
chr1 115873334 115873345 FOXH1 JASPAR yes 31729229
chr1 115873334 115873345 FOXH1 JASPAR yes 118355450
chr1 115873336 115873351 ESR2 JASPAR yes 31729230
chr1 115873336 115873351 ESR2 JASPAR yes 118355451
chr1 115873342 115873356 BATF3 JASPAR yes 31729231
chr1 115873342 115873356 BATF3 JASPAR yes 118355452
chr1 115873369 115873377 HOXA5 JASPAR yes 31729232
chr1 115873369 115873377 HOXA5 JASPAR yes 118355453
chr1 115873370 115873380 ALX3 JASPAR yes 31729233
chr1 115873370 115873380 EN2 JASPAR yes 31729234
chr1 115873370 115873380 ESX1 JASPAR yes 31729235
chr1 115873370 115873380 GBX1 JASPAR yes 31729236
chr1 115873370 115873380 LBX2 JASPAR yes 31729237
chr1 115873370 115873380 LHX2 JASPAR yes 31729238
chr1 115873370 115873380 MIXL1 JASPAR yes 31729239
chr1 115873370 115873380 ALX3 JASPAR yes 118355454
chr1 115873370 115873380 EN2 JASPAR yes 118355455
chr1 115873370 115873380 ESX1 JASPAR yes 118355456
chr1 115873370 115873380 GBX1 JASPAR yes 118355457
chr1 115873370 115873380 LBX2 JASPAR yes 118355458
chr1 115873370 115873380 LHX2 JASPAR yes 118355459
chr1 115873370 115873380 MIXL1 JASPAR yes 118355460
chr1 115873371 115873379 LHX9 JASPAR yes 31729240
chr1 115873371 115873379 SHOX JASPAR yes 31729241
chr1 115873371 115873379 LHX9 JASPAR yes 118355461
chr1 115873371 115873379 SHOX JASPAR yes 118355462
chr1 115873376 115873387 FOXC1 JASPAR yes 31729242
chr1 115873376 115873387 FOXC1 JASPAR yes 118355463
chr1 115873382 115873398 SOX8 JASPAR yes 31729243
chr1 115873382 115873398 SOX8 JASPAR yes 118355464
chr1 115873395 115873401 YY1 JASPAR yes 31729244
chr1 115873395 115873401 YY1 JASPAR yes 118355465
chr1 115873395 115873410 JUND JASPAR yes 31729245
chr1 115873395 115873410 JUND JASPAR yes 118355466
chr1 115873396 115873409 JUN JASPAR yes 31729246
chr1 115873396 115873409 JUN JASPAR yes 118355467
chr1 115873397 115873411 TLX1 JASPAR yes 31729247
chr1 115873397 115873411 TLX1 JASPAR yes 118355468
chr1 115873402 115873415 POU2F2 JASPAR yes 31729248
chr1 115873402 115873415 POU2F2 JASPAR yes 118355469
chr1 115873427 115873442 FOXP1 JASPAR yes 31729249
chr1 115873427 115873442 FOXP1 JASPAR yes 118355470
chr1 115873433 115873450 BCL6B JASPAR yes 31729250
chr1 115873433 115873450 BCL6B JASPAR yes 118355471
chr1 115873446 115873451 ETS2 TRANSFAC yes 31729251
chr1 115873446 115873451 ETS2 TRANSFAC yes 118355472
chr1 115873446 115873462 POU4F2 JASPAR yes 31729252
chr1 115873446 115873462 POU4F2 JASPAR yes 118355473
chr1 115873455 115873459 YY1 TRANSFAC yes 31729253
chr1 115873455 115873459 YY1 TRANSFAC yes 118355474
chr1 115873468 115873478 SMAD3 JASPAR yes 31729254
chr1 115873468 115873478 SMAD3 JASPAR yes 118355475
chr1 115873489 115873503 SPI1 JASPAR yes 31729255
chr1 115873489 115873503 SPI1 JASPAR yes 118355476
chr1 115873515 115873520 H4TF1 TRANSFAC yes 31729256
chr1 115873515 115873520 H4TF1 TRANSFAC yes 118355477
chr1 115873533 115873537 ESR1 TRANSFAC yes 31729257
chr1 115873533 115873537 ESR1 TRANSFAC yes 118355478
chr1 115873549 115873554 SP1 TRANSFAC yes 31729258
chr1 115873549 115873554 SP1 TRANSFAC yes 118355479
chr1 115873561 115873567 SOX10 JASPAR yes 31729259
chr1 115873561 115873567 SOX10 JASPAR yes 118355480
chr1 115873566 115873570 LFA1 TRANSFAC yes 31729260
chr1 115873566 115873570 LFA1 TRANSFAC yes 118355481
chr1 115873573 115873587 TLX1 JASPAR yes 31729261
chr1 115873573 115873587 TLX1 JASPAR yes 118355482
chr1 115873574 115873578 LFA1 TRANSFAC yes 31729262
chr1 115873574 115873578 LFA1 TRANSFAC yes 118355483
chr1 115873574 115873594 TP63 JASPAR yes 31729263
chr1 115873574 115873594 TP63 JASPAR yes 118355484
SNP sites on vista3031[chr1:115873164-115873576]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 115873316 rs116390634 C T
CTCF
579830
chr1 115873324 rs150470804 C G
CTCF
579831
chr1 115873337 rs561732645 T G
CTCF ESR2 FOXH1
579832
chr1 115873351 rs66486371 TCACTC T
BATF3 CTCF ESR2
579833
chr1 115873351 rs67088159 TCACTC T
BATF3 CTCF ESR2
579834
chr1 115873423 rs12067817 A G
CTCF
579835
chr1 115873468 rs79811171 G A
CTCF SMAD3
579836
Genes possibly regulated by vista3031[chr1:115873164-115873576]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 115828539 115880857 - NGF ENSG00000134259.3 115880857 0.9 1.0 1053 92719
Expression level of Genes
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miRNAs possibly regulated by vista3031[chr1:115873164-115873576]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results