EnhancerDB
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  3. rs79811171[chr1:115873468]
Enhancers that have rs79811171[chr1:115873468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115852725 115878429 enh12177
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Stomach Placenta Muscle (Myoblast) Breast Uterus Heart
chr1 115873164 115873576 vista3031
VISTA
Transcript factors that have rs79811171[chr1:115873468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115873019 115873479 CTCF UCSC Txn Factor no Conserved 107823608
chr1 115873132 115873488 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21330991
chr1 115873132 115873488 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107823609
chr1 115873291 115873613 ZNF274 GTRD no Bone Marrow (K562) 107823610
chr1 115873316 115873498 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21330992
chr1 115873316 115873498 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107823611
chr1 115873468 115873478 SMAD3 JASPAR yes 31729254
chr1 115873468 115873478 SMAD3 JASPAR yes 118355475
Genes associated with rs79811171[chr1:115873468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More