EnhancerDB
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  3. vista3040[chr1:116192575-116192950]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3040[chr1:116192575-116192950]
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Tissue distribution of vista3040
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Transcription factor that possibly regulate vista3040[chr1:116192575-116192950]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116192560 116192581 IRF1 JASPAR yes 31750236
chr1 116192560 116192581 ZNF263 JASPAR yes 31750237
chr1 116192560 116192581 IRF1 JASPAR yes 118355809
chr1 116192560 116192581 ZNF263 JASPAR yes 118355810
chr1 116192564 116192579 PRDM1 JASPAR yes 31750238
chr1 116192564 116192579 PRDM1 JASPAR yes 118355811
chr1 116192585 116192589 LFA1 TRANSFAC yes 31750239
chr1 116192585 116192589 LFA1 TRANSFAC yes 118355812
chr1 116192596 116192602 SOX10 JASPAR yes 31750240
chr1 116192596 116192602 SOX10 JASPAR yes 118355813
chr1 116192614 116192627 SMAD2 JASPAR yes 31750241
chr1 116192614 116192627 SMAD2 JASPAR yes 118355814
chr1 116192649 116192656 ETS1 TRANSFAC yes 31750242
chr1 116192649 116192656 ETS1 TRANSFAC yes 118355815
chr1 116192666 116192680 FOXF2 JASPAR yes 31750243
chr1 116192666 116192680 FOXF2 JASPAR yes 118355816
chr1 116192667 116192682 FOXA1 JASPAR yes 31750244
chr1 116192667 116192682 FOXA1 JASPAR yes 118355817
chr1 116192683 116192686 MYB TRANSFAC yes 31750245
chr1 116192683 116192686 MYB TRANSFAC yes 118355818
chr1 116192687 116192697 GSC2 JASPAR yes 31750246
chr1 116192687 116192697 GSC JASPAR yes 31750247
chr1 116192687 116192697 GSC2 JASPAR yes 118355819
chr1 116192687 116192697 GSC JASPAR yes 118355820
chr1 116192688 116192696 OTX1 JASPAR yes 31750248
chr1 116192688 116192696 OTX1 JASPAR yes 118355821
chr1 116192688 116192697 PITX3 JASPAR yes 31750249
chr1 116192688 116192697 PITX3 JASPAR yes 118355822
chr1 116192699 116192719 RREB1 JASPAR yes 31750250
chr1 116192699 116192719 RREB1 JASPAR yes 118355823
chr1 116192707 116192727 RREB1 JASPAR yes 31750251
chr1 116192707 116192727 RREB1 JASPAR yes 118355824
chr1 116192728 116192736 HOXA5 JASPAR yes 31750252
chr1 116192728 116192736 HOXA5 JASPAR yes 118355825
chr1 116192728 116192746 MAFF JASPAR yes 31750253
chr1 116192728 116192746 MAFF JASPAR yes 118355826
chr1 116192730 116192741 NRL JASPAR yes 31750254
chr1 116192730 116192741 NRL JASPAR yes 118355827
chr1 116192730 116192745 MAFK JASPAR yes 31750255
chr1 116192730 116192745 MAFK JASPAR yes 118355828
chr1 116192763 116192778 RFX5 JASPAR yes 31750256
chr1 116192763 116192778 RFX5 JASPAR yes 118355829
chr1 116192767 116192779 INSM1 JASPAR yes 31750257
chr1 116192767 116192779 INSM1 JASPAR yes 118355830
chr1 116192772 116192790 ESR1 JASPAR yes 31750258
chr1 116192772 116192790 ESR1 JASPAR yes 118355831
chr1 116192773 116192788 ESR2 JASPAR yes 31750259
chr1 116192773 116192788 ESR2 JASPAR yes 118355832
chr1 116192773 116192790 RXRA JASPAR yes 31750260
chr1 116192773 116192790 RXRA JASPAR yes 118355833
chr1 116192773 116192793 ESR1 JASPAR yes 31750261
chr1 116192773 116192793 ESR1 JASPAR yes 118355834
chr1 116192774 116192778 ESR1 TRANSFAC yes 31750262
chr1 116192774 116192778 ESR1 TRANSFAC yes 118355835
chr1 116192785 116192792 E2F1 TRANSFAC yes 31750263
chr1 116192785 116192792 E2F1 TRANSFAC yes 118355836
chr1 116192786 116192800 TLX1 JASPAR yes 31750264
chr1 116192786 116192800 TLX1 JASPAR yes 118355837
chr1 116192795 116192806 EBF1 JASPAR yes 31750265
chr1 116192795 116192806 EBF1 JASPAR yes 118355838
chr1 116192801 116192818 ZNF410 JASPAR yes 31750266
chr1 116192801 116192818 ZNF410 JASPAR yes 118355839
chr1 116192817 116192821 YY1 TRANSFAC yes 31750267
chr1 116192817 116192821 YY1 TRANSFAC yes 118355840
chr1 116192829 116192835 LEF1 TRANSFAC yes 31750268
chr1 116192829 116192835 SOX10 JASPAR yes 31750269
chr1 116192829 116192835 LEF1 TRANSFAC yes 118355841
chr1 116192829 116192835 SOX10 JASPAR yes 118355842
chr1 116192829 116192844 FOXP1 JASPAR yes 31750270
chr1 116192829 116192844 FOXP1 JASPAR yes 118355843
chr1 116192830 116192841 FOXP2 JASPAR yes 31750271
chr1 116192830 116192841 FOXP2 JASPAR yes 118355844
chr1 116192838 116192851 EOMES JASPAR yes 31750272
chr1 116192838 116192851 EOMES JASPAR yes 118355845
chr1 116192840 116192850 TBR1 JASPAR yes 31750273
chr1 116192840 116192850 TBR1 JASPAR yes 118355846
chr1 116192840 116192851 TBX20 JASPAR yes 31750274
chr1 116192840 116192851 TBX2 JASPAR yes 31750275
chr1 116192840 116192851 TBX20 JASPAR yes 118355847
chr1 116192840 116192851 TBX2 JASPAR yes 118355848
chr1 116192841 116192851 TBX21 JASPAR yes 31750276
chr1 116192841 116192851 TBX21 JASPAR yes 118355849
chr1 116192842 116192850 MGA JASPAR yes 31750277
chr1 116192842 116192850 TBX15 JASPAR yes 31750278
chr1 116192842 116192850 TBX1 JASPAR yes 31750279
chr1 116192842 116192850 TBX4 JASPAR yes 31750280
chr1 116192842 116192850 TBX5 JASPAR yes 31750281
chr1 116192842 116192850 MGA JASPAR yes 118355850
chr1 116192842 116192850 TBX15 JASPAR yes 118355851
chr1 116192842 116192850 TBX1 JASPAR yes 118355852
chr1 116192842 116192850 TBX4 JASPAR yes 118355853
chr1 116192842 116192850 TBX5 JASPAR yes 118355854
chr1 116192860 116192875 FOXP1 JASPAR yes 31750282
chr1 116192860 116192875 FOXP1 JASPAR yes 118355855
chr1 116192860 116192881 IRF1 JASPAR yes 31750283
chr1 116192860 116192881 IRF1 JASPAR yes 118355856
chr1 116192863 116192874 FOXA1 JASPAR yes 31750284
chr1 116192863 116192874 FOXA1 JASPAR yes 118355857
chr1 116192868 116192883 STAT2 JASPAR yes 31750285
chr1 116192868 116192883 STAT2 JASPAR yes 118355858
chr1 116192869 116192883 STAT1 JASPAR yes 31750286
chr1 116192869 116192883 STAT1 JASPAR yes 118355859
chr1 116192895 116192900 ETS2 TRANSFAC yes 31750287
chr1 116192895 116192900 ETS2 TRANSFAC yes 118355860
chr1 116192897 116192911 ZIC1 JASPAR yes 31750288
chr1 116192897 116192911 ZIC1 JASPAR yes 118355861
chr1 116192897 116192912 SCRT1 JASPAR yes 31750289
chr1 116192897 116192912 ZIC4 JASPAR yes 31750290
chr1 116192897 116192912 SCRT1 JASPAR yes 118355862
chr1 116192897 116192912 ZIC4 JASPAR yes 118355863
chr1 116192923 116192933 SREBF1 JASPAR yes 31750291
chr1 116192923 116192933 SREBF2 JASPAR yes 31750292
chr1 116192923 116192933 SREBF1 JASPAR yes 118355864
chr1 116192923 116192933 SREBF2 JASPAR yes 118355865
chr1 116192926 116192936 SP1 JASPAR yes 31750293
chr1 116192926 116192936 SP1 JASPAR yes 118355866
chr1 116192948 116192963 SCRT1 JASPAR yes 31750294
chr1 116192948 116192963 SCRT1 JASPAR yes 118355867
chr1 116192950 116192963 SCRT2 JASPAR yes 31750295
chr1 116192950 116192963 SCRT2 JASPAR yes 118355868
SNP sites on vista3040[chr1:116192575-116192950]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116192607 rs111981008 CTGGCCCTGGG C no 582108
chr1 116192607 rs376135034 CTGGCCCTGGG C no 582109
chr1 116192654 rs73007421 G A
ETS1
582110
chr1 116192755 rs74114599 G A no 582111
chr1 116192829 rs6691490 C T
FOXP1 LEF1 SOX10
582112
Genes possibly regulated by vista3040[chr1:116192575-116192950]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116184574 116240845 + VANGL1 ENSG00000173218.10 116184574 0.8 0.99 1054 91999
Expression level of Genes
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miRNAs possibly regulated by vista3040[chr1:116192575-116192950]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results