EnhancerDB
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  3. rs6691490[chr1:116192829]
Enhancers that have rs6691490[chr1:116192829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116187765 116201595 enh27094
Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 116192575 116192950 vista3040
VISTA
Transcript factors that have rs6691490[chr1:116192829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116192669 116193105 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107823770
chr1 116192684 116192994 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107823771
chr1 116192829 116192835 LEF1 TRANSFAC yes 31750268
chr1 116192829 116192835 SOX10 JASPAR yes 31750269
chr1 116192829 116192835 LEF1 TRANSFAC yes 118355841
chr1 116192829 116192835 SOX10 JASPAR yes 118355842
chr1 116192829 116192844 FOXP1 JASPAR yes 31750270
chr1 116192829 116192844 FOXP1 JASPAR yes 118355843
Genes associated with rs6691490[chr1:116192829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More