EnhancerDB
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  3. vista3059[chr1:117046366-117046546]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3059[chr1:117046366-117046546]
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Tissue distribution of vista3059
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Transcription factor that possibly regulate vista3059[chr1:117046366-117046546]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117046309 117046580 RUNX3 UCSC Txn Factor no Conserved 107824360
chr1 117046488 117047632 POLR2A UCSC Txn Factor no Conserved 107824362
chr1 117046488 117047632 POLR2A UCSC Txn Factor no Conserved 107824363
chr1 117046373 117046384 GCM1 JASPAR yes 31814835
chr1 117046373 117046384 GCM1 JASPAR yes 118356801
chr1 117046385 117046389 NFE TRANSFAC yes 31814836
chr1 117046385 117046389 NFE TRANSFAC yes 118356802
chr1 117046411 117046422 FLI1 JASPAR yes 31814837
chr1 117046411 117046422 FLI1 JASPAR yes 118356803
chr1 117046411 117046424 ELF3 JASPAR yes 31814838
chr1 117046411 117046424 ELF3 JASPAR yes 118356804
chr1 117046412 117046422 ETV6 JASPAR yes 31814839
chr1 117046412 117046422 ETV6 JASPAR yes 118356805
chr1 117046412 117046423 ELF5 JASPAR yes 31814840
chr1 117046412 117046423 ELF5 JASPAR yes 118356806
chr1 117046412 117046425 ELF1 JASPAR yes 31814841
chr1 117046412 117046425 ELF1 JASPAR yes 118356807
chr1 117046413 117046420 SPI1 JASPAR yes 31814842
chr1 117046413 117046420 SPI1 JASPAR yes 118356808
chr1 117046413 117046421 EHF JASPAR yes 31814843
chr1 117046413 117046421 EHF JASPAR yes 118356809
chr1 117046416 117046431 RUNX2 JASPAR yes 31814844
chr1 117046416 117046431 RUNX2 JASPAR yes 118356810
chr1 117046419 117046430 RUNX1 JASPAR yes 31814845
chr1 117046419 117046430 RUNX1 JASPAR yes 118356811
chr1 117046420 117046430 RUNX3 JASPAR yes 31814846
chr1 117046420 117046430 RUNX3 JASPAR yes 118356812
chr1 117046421 117046430 RUNX2 JASPAR yes 31814847
chr1 117046421 117046430 RUNX2 JASPAR yes 118356813
chr1 117046456 117046460 H1TF2 TRANSFAC yes 31814848
chr1 117046456 117046460 NFE TRANSFAC yes 31814849
chr1 117046456 117046460 SRF TRANSFAC yes 31814850
chr1 117046456 117046460 H1TF2 TRANSFAC yes 118356814
chr1 117046456 117046460 NFE TRANSFAC yes 118356815
chr1 117046456 117046460 SRF TRANSFAC yes 118356816
chr1 117046459 117046473 TCF7L2 JASPAR yes 31814851
chr1 117046459 117046473 TCF7L2 JASPAR yes 118356817
chr1 117046459 117046474 LEF1 JASPAR yes 31814852
chr1 117046459 117046474 LEF1 JASPAR yes 118356818
chr1 117046472 117046485 POU3F3 JASPAR yes 31814853
chr1 117046472 117046485 POU3F3 JASPAR yes 118356819
chr1 117046480 117046484 YY1 TRANSFAC yes 31814854
chr1 117046480 117046484 YY1 TRANSFAC yes 118356820
chr1 117046495 117046506 CEBPB JASPAR yes 31814855
chr1 117046495 117046506 CEBPB JASPAR yes 118356821
chr1 117046495 117046507 HLF JASPAR yes 31814856
chr1 117046495 117046507 HLF JASPAR yes 118356822
chr1 117046496 117046507 CEBPA JASPAR yes 31814857
chr1 117046496 117046507 CEBPA JASPAR yes 118356823
chr1 117046506 117046511 H4TF1 TRANSFAC yes 31814858
chr1 117046506 117046511 H4TF1 TRANSFAC yes 118356824
chr1 117046531 117046549 MAFF JASPAR yes 31814859
chr1 117046531 117046549 MAFF JASPAR yes 118356825
chr1 117046541 117046545 YY1 TRANSFAC yes 31814860
chr1 117046541 117046545 YY1 TRANSFAC yes 118356826
chr1 117046544 117046548 YY1 TRANSFAC yes 31814861
chr1 117046544 117046548 YY1 TRANSFAC yes 118356827
SNP sites on vista3059[chr1:117046366-117046546]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117046497 rs543414667 G T
CEBPA CEBPB HLF POLR2A RUNX3
589358
chr1 117046539 rs117359405 C T
MAFF POLR2A RUNX3
589359
Genes possibly regulated by vista3059[chr1:117046366-117046546]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 32885
Expression level of Genes
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miRNAs possibly regulated by vista3059[chr1:117046366-117046546]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results