EnhancerDB
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  3. rs117359405[chr1:117046539]
Enhancers that have rs117359405[chr1:117046539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 117046366 117046546 vista3059
VISTA
Transcript factors that have rs117359405[chr1:117046539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117046113 117046709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333188
chr1 117046113 117046709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824358
chr1 117046309 117046580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333190
chr1 117046309 117046580 RUNX3 UCSC Txn Factor no Conserved 107824360
chr1 117046309 117046580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824361
chr1 117046488 117047632 POLR2A UCSC Txn Factor no Conserved 107824362
chr1 117046488 117047632 POLR2A UCSC Txn Factor no Conserved 107824363
chr1 117046510 117046910 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333191
chr1 117046510 117046910 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824364
chr1 117046523 117047167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333192
chr1 117046523 117047167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824365
chr1 117046523 117047167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824366
chr1 117046531 117046549 MAFF JASPAR yes 31814859
chr1 117046531 117046549 MAFF JASPAR yes 118356825
chr1 117046534 117047110 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333193
chr1 117046534 117047110 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824367
chr1 117046534 117047110 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824368
Genes associated with rs117359405[chr1:117046539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More