EnhancerDB
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  3. vista30686[chr2:24122171-24122336]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30686[chr2:24122171-24122336]
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Tissue distribution of vista30686
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Transcription factor that possibly regulate vista30686[chr2:24122171-24122336]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 24122164 24122184 RREB1 JASPAR yes 22017812
chr2 24122164 24122184 RREB1 JASPAR yes 72395141
chr2 24122170 24122185 FOXP1 JASPAR yes 22017813
chr2 24122170 24122185 FOXP1 JASPAR yes 72395142
chr2 24122171 24122186 FOXP1 JASPAR yes 22017814
chr2 24122171 24122186 FOXP1 JASPAR yes 72395143
chr2 24122172 24122187 FOXP1 JASPAR yes 22017815
chr2 24122172 24122187 FOXP1 JASPAR yes 72395144
chr2 24122173 24122188 FOXP1 JASPAR yes 22017816
chr2 24122173 24122188 FOXP1 JASPAR yes 72395145
chr2 24122173 24122194 IRF1 JASPAR yes 22017817
chr2 24122173 24122194 IRF1 JASPAR yes 72395146
chr2 24122174 24122189 FOXP1 JASPAR yes 22017818
chr2 24122174 24122189 FOXP1 JASPAR yes 72395147
chr2 24122174 24122195 IRF1 JASPAR yes 22017819
chr2 24122174 24122195 IRF1 JASPAR yes 72395148
chr2 24122175 24122190 FOXP1 JASPAR yes 22017820
chr2 24122175 24122190 FOXP1 JASPAR yes 72395149
chr2 24122176 24122191 FOXP1 JASPAR yes 22017821
chr2 24122176 24122191 FOXP1 JASPAR yes 72395150
chr2 24122176 24122197 IRF1 JASPAR yes 22017822
chr2 24122176 24122197 IRF1 JASPAR yes 72395151
chr2 24122177 24122192 FOXP1 JASPAR yes 22017823
chr2 24122177 24122192 FOXP1 JASPAR yes 72395152
chr2 24122180 24122195 STAT2 JASPAR yes 22017824
chr2 24122180 24122195 STAT2 JASPAR yes 72395153
chr2 24122188 24122203 RUNX2 JASPAR yes 22017825
chr2 24122188 24122203 RUNX2 JASPAR yes 72395154
chr2 24122235 24122240 MYB TRANSFAC yes 22017826
chr2 24122235 24122240 MYB TRANSFAC yes 72395155
chr2 24122260 24122264 TEAD2 TRANSFAC yes 22017827
chr2 24122260 24122264 TEAD2 TRANSFAC yes 72395156
chr2 24122260 24122270 ALX3 JASPAR yes 22017828
chr2 24122260 24122270 MNX1 JASPAR yes 22017829
chr2 24122260 24122270 ALX3 JASPAR yes 72395157
chr2 24122260 24122270 MNX1 JASPAR yes 72395158
chr2 24122261 24122269 LMX1A JASPAR yes 22017830
chr2 24122261 24122269 LMX1B JASPAR yes 22017831
chr2 24122261 24122269 NKX6-1 JASPAR yes 22017832
chr2 24122261 24122269 NKX6-2 JASPAR yes 22017833
chr2 24122261 24122269 VAX1 JASPAR yes 22017834
chr2 24122261 24122269 VAX2 JASPAR yes 22017835
chr2 24122261 24122269 VSX1 JASPAR yes 22017836
chr2 24122261 24122269 VSX2 JASPAR yes 22017837
chr2 24122261 24122269 LMX1A JASPAR yes 72395159
chr2 24122261 24122269 LMX1B JASPAR yes 72395160
chr2 24122261 24122269 NKX6-1 JASPAR yes 72395161
chr2 24122261 24122269 NKX6-2 JASPAR yes 72395162
chr2 24122261 24122269 VAX1 JASPAR yes 72395163
chr2 24122261 24122269 VAX2 JASPAR yes 72395164
chr2 24122261 24122269 VSX1 JASPAR yes 72395165
chr2 24122261 24122269 VSX2 JASPAR yes 72395166
chr2 24122285 24122289 TEAD2 TRANSFAC yes 22017838
chr2 24122285 24122289 TEAD2 TRANSFAC yes 72395167
chr2 24122296 24122308 HNF1B JASPAR yes 22017839
chr2 24122296 24122308 HNF1B JASPAR yes 72395168
chr2 24122301 24122312 PHOX2A JASPAR yes 22017840
chr2 24122301 24122312 PHOX2A JASPAR yes 72395169
SNP sites on vista30686[chr2:24122171-24122336]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 24122173 rs556774553 CA C
FOXP1 IRF1 RREB1
5587257
chr2 24122185 rs184028668 A C
FOXP1 IRF1 STAT2
5587258
chr2 24122222 rs368240396 C T no 5587259
Genes possibly regulated by vista30686[chr2:24122171-24122336]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 23971534 24149984 - ATAD2B ENSG00000119778.10 24149984 0.8 0.98 2161 72352
chr2 24150155 24227779 + UBXN2A ENSG00000173960.8 24150155 0.68 0.98 2162 72181
Expression level of Genes
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miRNAs possibly regulated by vista30686[chr2:24122171-24122336]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results