EnhancerDB
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  3. rs556774553[chr2:24122173]
Enhancers that have rs556774553[chr2:24122173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 24121345 24130355 enh5351
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (A549) Stomach Muscle (A673) Placenta Breast Blood (Karpas-422) Pancreas Epithelial (MCF-7)
chr2 24122171 24122336 vista30686
VISTA
Transcript factors that have rs556774553[chr2:24122173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 24122164 24122184 RREB1 JASPAR yes 22017812
chr2 24122164 24122184 RREB1 JASPAR yes 72395141
chr2 24122170 24122185 FOXP1 JASPAR yes 22017813
chr2 24122170 24122185 FOXP1 JASPAR yes 72395142
chr2 24122171 24122186 FOXP1 JASPAR yes 22017814
chr2 24122171 24122186 FOXP1 JASPAR yes 72395143
chr2 24122172 24122187 FOXP1 JASPAR yes 22017815
chr2 24122172 24122187 FOXP1 JASPAR yes 72395144
chr2 24122173 24122188 FOXP1 JASPAR yes 22017816
chr2 24122173 24122188 FOXP1 JASPAR yes 72395145
chr2 24122173 24122194 IRF1 JASPAR yes 22017817
chr2 24122173 24122194 IRF1 JASPAR yes 72395146
Genes associated with rs556774553[chr2:24122173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More