EnhancerDB
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  3. vista3070[chr1:117110819-117111247]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3070[chr1:117110819-117111247]
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Tissue distribution of vista3070
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Transcription factor that possibly regulate vista3070[chr1:117110819-117111247]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824682
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824683
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824684
chr1 117110860 117110869 JDP2 JASPAR yes 118357374
chr1 117110883 117110892 ZEB1 JASPAR yes 118357375
chr1 117110884 117110898 CREB3L1 JASPAR yes 118357376
chr1 117110888 117110899 TBX2 JASPAR yes 118357377
chr1 117110889 117110897 TBX15 JASPAR yes 118357378
chr1 117110889 117110897 TBX1 JASPAR yes 118357379
chr1 117110889 117110897 TBX4 JASPAR yes 118357380
chr1 117110889 117110897 TBX5 JASPAR yes 118357381
chr1 117110907 117110922 SOX21 JASPAR yes 118357382
chr1 117110921 117110927 NFIC JASPAR yes 118357383
chr1 117110921 117110936 MEF2C JASPAR yes 118357384
chr1 117110922 117110937 MEF2A JASPAR yes 118357385
chr1 117110931 117110934 MYB TRANSFAC yes 118357386
chr1 117110931 117110943 TGIF1 JASPAR yes 118357387
chr1 117110932 117110942 NEUROG2 JASPAR yes 118357388
chr1 117110932 117110944 TAL1 JASPAR yes 118357389
chr1 117110936 117110942 YY1 JASPAR yes 118357390
chr1 117110937 117110952 MEF2C JASPAR yes 118357391
chr1 117110938 117110953 MEF2A JASPAR yes 118357392
chr1 117110947 117110950 MYB TRANSFAC yes 118357393
chr1 117110949 117110955 SOX10 JASPAR yes 118357394
chr1 117110967 117110979 MYBL1 JASPAR yes 118357395
chr1 117110972 117110975 MYB TRANSFAC yes 118357396
chr1 117110983 117110998 PRDM1 JASPAR yes 118357397
chr1 117110993 117111005 POU2F1 JASPAR yes 118357398
chr1 117110993 117111006 POU3F3 JASPAR yes 118357399
chr1 117111016 117111027 CEBPA JASPAR yes 118357400
chr1 117111017 117111028 CEBPB JASPAR yes 118357401
chr1 117111026 117111030 NFE TRANSFAC yes 118357402
chr1 117111033 117111049 SOX4 JASPAR yes 118357403
chr1 117111033 117111049 SOX8 JASPAR yes 118357404
chr1 117111038 117111049 HOXA10 JASPAR yes 118357405
chr1 117111039 117111049 GSX2 JASPAR yes 118357406
chr1 117111039 117111049 MNX1 JASPAR yes 118357407
chr1 117111040 117111048 BARX1 JASPAR yes 118357408
chr1 117111040 117111049 VENTX JASPAR yes 118357409
chr1 117111080 117111090 HOXC10 JASPAR yes 118357410
chr1 117111080 117111090 HOXD11 JASPAR yes 118357411
chr1 117111080 117111091 HOXC11 JASPAR yes 118357412
chr1 117111080 117111091 HOXC12 JASPAR yes 118357413
chr1 117111080 117111091 HOXD12 JASPAR yes 118357414
chr1 117111083 117111086 MYB TRANSFAC yes 118357415
chr1 117111093 117111104 TBX20 JASPAR yes 118357416
chr1 117111105 117111111 TCF4 TRANSFAC yes 118357417
chr1 117111112 117111123 BATF JASPAR yes 118357418
chr1 117111117 117111132 TP53 JASPAR yes 118357419
chr1 117111129 117111144 HNF1A JASPAR yes 118357420
chr1 117111130 117111143 HNF1B JASPAR yes 118357421
chr1 117111131 117111146 FOXA1 JASPAR yes 118357422
chr1 117111133 117111144 FOXP2 JASPAR yes 118357423
chr1 117111133 117111145 FOXC2 JASPAR yes 118357424
chr1 117111133 117111147 FOXF2 JASPAR yes 118357425
chr1 117111134 117111142 FOXD1 JASPAR yes 118357426
chr1 117111134 117111142 FOXG1 JASPAR yes 118357427
chr1 117111134 117111142 FOXO3 JASPAR yes 118357428
chr1 117111134 117111145 FOXB1 JASPAR yes 118357429
chr1 117111134 117111145 FOXC1 JASPAR yes 118357430
chr1 117111135 117111142 FOXD2 JASPAR yes 118357431
chr1 117111135 117111142 FOXI1 JASPAR yes 118357432
chr1 117111135 117111142 FOXL1 JASPAR yes 118357433
chr1 117111135 117111142 FOXO4 JASPAR yes 118357434
chr1 117111135 117111142 FOXO6 JASPAR yes 118357435
chr1 117111135 117111142 FOXP3 JASPAR yes 118357436
chr1 117111135 117111146 FOXA1 JASPAR yes 118357437
chr1 117111156 117111168 YY1 JASPAR yes 118357438
chr1 117111162 117111177 FOXP1 JASPAR yes 118357439
chr1 117111166 117111181 HNF1A JASPAR yes 118357440
chr1 117111167 117111180 HNF1B JASPAR yes 118357441
chr1 117111168 117111179 BATF JASPAR yes 118357442
chr1 117111171 117111185 POU1F1 JASPAR yes 118357443
chr1 117111173 117111177 YY1 TRANSFAC yes 118357444
chr1 117111176 117111183 NKX3-1 JASPAR yes 118357445
chr1 117111183 117111187 NFE TRANSFAC yes 118357446
chr1 117111183 117111196 SMAD2 JASPAR yes 118357447
chr1 117111200 117111204 TEAD2 TRANSFAC yes 118357448
chr1 117111215 117111221 SOX10 JASPAR yes 118357449
SNP sites on vista3070[chr1:117110819-117111247]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117110902 rs75294611 A G
POLR2A
589770
chr1 117110949 rs72999949 A T
MEF2A MEF2C MYB POLR2A SOX10
589771
chr1 117110998 rs74970720 C T
POLR2A POU2F1 POU3F3 PRDM1
589772
chr1 117111014 rs79975602 A G
POLR2A
589773
chr1 117111177 rs77333878 T A
BATF FOXP1 HNF1A HNF1B NKX3-1 POLR2A POU1F1 YY1
589774
chr1 117111236 rs72999951 A T
POLR2A
589775
Genes possibly regulated by vista3070[chr1:117110819-117111247]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 97586
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 872
Expression level of Genes
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miRNAs possibly regulated by vista3070[chr1:117110819-117111247]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results