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- rs72999949[chr1:117110949]
Enhancers that have rs72999949[chr1:117110949]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
117110819 |
117111247 |
vista3070 |
|
|
Transcript factors that have rs72999949[chr1:117110949]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
117105596
|
117114442
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21333510
|
|
|
chr1
|
117105596
|
117114442
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107824678
|
|
|
chr1
|
117105596
|
117114442
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107824679
|
|
|
chr1
|
117105596
|
117114442
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107824680
|
|
|
chr1
|
117109786
|
117111016
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107824681
|
|
|
chr1
|
117110307
|
117114109
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107824682
|
|
|
chr1
|
117110307
|
117114109
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107824683
|
|
|
chr1
|
117110307
|
117114109
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107824684
|
|
|
chr1
|
117110348
|
117111490
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
107824685
|
|
|
chr1
|
117110554
|
117111226
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107824686
|
|
|
chr1
|
117110564
|
117110964
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824687
|
|
|
chr1
|
117110612
|
117111174
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107824688
|
|
|
chr1
|
117110693
|
117111285
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107824689
|
|
|
chr1
|
117110718
|
117111228
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107824690
|
|
|
chr1
|
117110746
|
117111192
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107824691
|
|
|
chr1
|
117110767
|
117111151
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824692
|
|
|
chr1
|
117110768
|
117111197
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107824693
|
|
|
chr1
|
117110770
|
117111430
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824694
|
|
|
chr1
|
117110785
|
117111245
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824695
|
|
|
chr1
|
117110806
|
117111096
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824696
|
|
|
chr1
|
117110826
|
117111287
|
ERG
|
GTRD
|
no
|
Prostate (RWPE1)
|
107824697
|
|
|
chr1
|
117110826
|
117111346
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824698
|
|
|
chr1
|
117110862
|
117111546
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824699
|
|
|
chr1
|
117110868
|
117111384
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824700
|
|
|
chr1
|
117110917
|
117111513
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824701
|
|
|
chr1
|
117110929
|
117111259
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824702
|
|
|
chr1
|
117110933
|
117111213
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824703
|
|
|
chr1
|
117110936
|
117111346
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107824704
|
|
|
chr1
|
117110937
|
117110952
|
MEF2C
|
JASPAR
|
yes
|
|
118357391
|
|
|
chr1
|
117110938
|
117110953
|
MEF2A
|
JASPAR
|
yes
|
|
118357392
|
|
|
chr1
|
117110947
|
117110950
|
MYB
|
TRANSFAC
|
yes
|
|
118357393
|
|
|
chr1
|
117110949
|
117110955
|
SOX10
|
JASPAR
|
yes
|
|
118357394
|
|
Genes associated with rs72999949[chr1:117110949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |