EnhancerDB
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  3. vista30788[chr2:27958320-27958698]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30788[chr2:27958320-27958698]
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Tissue distribution of vista30788
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Transcription factor that possibly regulate vista30788[chr2:27958320-27958698]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 27958194 27958906 POLR2A UCSC Txn Factor no Conserved 108431544
chr2 27958339 27958780 STAT1 UCSC Txn Factor no Conserved 108431545
chr2 27958395 27959234 E2F1 UCSC Txn Factor no Conserved 108431546
chr2 27958432 27958694 STAT3 UCSC Txn Factor no Conserved 108431547
chr2 27958520 27958774 EGR1 UCSC Txn Factor no Conserved 108431548
chr2 27958305 27958320 STAT1 JASPAR yes 22022485
chr2 27958305 27958320 STAT1 JASPAR yes 72587108
chr2 27958316 27958325 NFIX JASPAR yes 22022486
chr2 27958316 27958325 NFIX JASPAR yes 72587110
chr2 27958316 27958326 NFIA JASPAR yes 22022487
chr2 27958316 27958326 NFIA JASPAR yes 72587111
chr2 27958318 27958324 NFIC JASPAR yes 22022488
chr2 27958318 27958324 NFIC JASPAR yes 72587112
chr2 27958323 27958338 PRDM1 JASPAR yes 22022489
chr2 27958323 27958338 PRDM1 JASPAR yes 72587113
chr2 27958357 27958362 SP1 TRANSFAC yes 22022490
chr2 27958357 27958362 SP1 TRANSFAC yes 72587114
chr2 27958361 27958376 STAT1 JASPAR yes 22022491
chr2 27958361 27958376 STAT1 JASPAR yes 72587115
chr2 27958363 27958374 STAT3 JASPAR yes 22022492
chr2 27958363 27958374 STAT3 JASPAR yes 72587116
chr2 27958363 27958378 RFX5 JASPAR yes 22022493
chr2 27958363 27958378 RFX5 JASPAR yes 72587117
chr2 27958378 27958397 REST JASPAR yes 22022494
chr2 27958378 27958397 REST JASPAR yes 72587118
chr2 27958381 27958386 SP1 TRANSFAC yes 22022495
chr2 27958381 27958386 SP1 TRANSFAC yes 72587119
chr2 27958383 27958396 TFAP2B JASPAR yes 22022496
chr2 27958383 27958396 TFAP2C JASPAR yes 22022497
chr2 27958383 27958396 TFAP2B JASPAR yes 72587120
chr2 27958383 27958396 TFAP2C JASPAR yes 72587121
chr2 27958393 27958404 E2F4 JASPAR yes 22022498
chr2 27958393 27958404 E2F6 JASPAR yes 22022499
chr2 27958393 27958404 E2F4 JASPAR yes 72587122
chr2 27958393 27958404 E2F6 JASPAR yes 72587123
chr2 27958402 27958417 TFAP2C JASPAR yes 22022500
chr2 27958402 27958417 TFAP2C JASPAR yes 72587124
chr2 27958406 27958412 MZF1 JASPAR yes 22022501
chr2 27958406 27958412 MZF1 JASPAR yes 72587125
chr2 27958423 27958427 LFA1 TRANSFAC yes 22022502
chr2 27958423 27958427 LFA1 TRANSFAC yes 72587126
chr2 27958445 27958465 ESR1 JASPAR yes 22022503
chr2 27958445 27958465 ESR1 JASPAR yes 72587127
chr2 27958477 27958482 SP1 TRANSFAC yes 22022504
chr2 27958477 27958482 SP1 TRANSFAC yes 72587128
chr2 27958507 27958512 GATA2 JASPAR yes 22022505
chr2 27958507 27958512 GATA2 JASPAR yes 72587129
chr2 27958508 27958519 SPDEF JASPAR yes 22022506
chr2 27958508 27958519 SPDEF JASPAR yes 72587130
chr2 27958508 27958523 STAT1 JASPAR yes 22022507
chr2 27958508 27958523 STAT1 JASPAR yes 72587131
chr2 27958510 27958515 GATA2 JASPAR yes 22022508
chr2 27958510 27958515 GATA2 JASPAR yes 72587132
chr2 27958515 27958520 ETS2 TRANSFAC yes 22022509
chr2 27958515 27958520 ETS2 TRANSFAC yes 72587133
chr2 27958519 27958525 SP1 TRANSFAC yes 22022510
chr2 27958519 27958525 SP1 TRANSFAC yes 72587134
chr2 27958520 27958525 SP1 TRANSFAC yes 22022511
chr2 27958520 27958525 SP1 TRANSFAC yes 72587135
chr2 27958521 27958526 SP1 TRANSFAC yes 22022512
chr2 27958521 27958526 SP1 TRANSFAC yes 72587136
chr2 27958539 27958559 TP63 JASPAR yes 22022513
chr2 27958539 27958559 TP63 JASPAR yes 72587137
chr2 27958549 27958560 STAT1 JASPAR yes 22022514
chr2 27958549 27958560 STAT3 JASPAR yes 22022515
chr2 27958549 27958560 STAT1 JASPAR yes 72587138
chr2 27958549 27958560 STAT3 JASPAR yes 72587139
chr2 27958554 27958559 ETS2 TRANSFAC yes 22022516
chr2 27958554 27958559 ETS2 TRANSFAC yes 72587140
chr2 27958563 27958569 NFE2 TRANSFAC yes 22022517
chr2 27958563 27958569 NFE2 TRANSFAC yes 72587141
chr2 27958567 27958582 STAT1 JASPAR yes 22022518
chr2 27958567 27958582 STAT1 JASPAR yes 72587142
chr2 27958569 27958580 STAT1 JASPAR yes 22022519
chr2 27958569 27958580 STAT3 JASPAR yes 22022520
chr2 27958569 27958580 STAT1 JASPAR yes 72587143
chr2 27958569 27958580 STAT3 JASPAR yes 72587144
chr2 27958570 27958578 STAT6 TRANSFAC yes 22022521
chr2 27958570 27958578 STAT6 TRANSFAC yes 72587145
chr2 27958574 27958579 ETS2 TRANSFAC yes 22022522
chr2 27958574 27958579 ETS2 TRANSFAC yes 72587146
chr2 27958589 27958600 ESRRA JASPAR yes 22022523
chr2 27958589 27958600 ESRRA JASPAR yes 72587147
chr2 27958593 27958597 LFA1 TRANSFAC yes 22022524
chr2 27958593 27958597 LFA1 TRANSFAC yes 72587148
chr2 27958597 27958607 ZNF740 JASPAR yes 22022525
chr2 27958597 27958607 ZNF740 JASPAR yes 72587149
chr2 27958598 27958608 GCM2 JASPAR yes 22022526
chr2 27958598 27958608 GCM2 JASPAR yes 72587150
chr2 27958598 27958610 INSM1 JASPAR yes 22022527
chr2 27958598 27958610 INSM1 JASPAR yes 72587151
chr2 27958605 27958614 HIC2 JASPAR yes 22022528
chr2 27958605 27958614 HIC2 JASPAR yes 72587152
chr2 27958606 27958623 RXRA JASPAR yes 22022529
chr2 27958606 27958623 RXRA JASPAR yes 72587153
chr2 27958622 27958632 SP1 JASPAR yes 22022530
chr2 27958622 27958632 SP1 JASPAR yes 72587154
chr2 27958624 27958635 ELK4 JASPAR yes 22022531
chr2 27958624 27958635 FLI1 JASPAR yes 22022532
chr2 27958624 27958635 ELK4 JASPAR yes 72587155
chr2 27958624 27958635 FLI1 JASPAR yes 72587156
chr2 27958625 27958635 ELK1 JASPAR yes 22022533
chr2 27958625 27958635 ELK3 JASPAR yes 22022534
chr2 27958625 27958635 ERF JASPAR yes 22022535
chr2 27958625 27958635 ERG JASPAR yes 22022536
chr2 27958625 27958635 ETS1 JASPAR yes 22022537
chr2 27958625 27958635 ETV1 JASPAR yes 22022538
chr2 27958625 27958635 ETV3 JASPAR yes 22022539
chr2 27958625 27958635 ETV4 JASPAR yes 22022540
chr2 27958625 27958635 ETV5 JASPAR yes 22022541
chr2 27958625 27958635 ETV6 JASPAR yes 22022542
chr2 27958625 27958635 FEV JASPAR yes 22022543
chr2 27958625 27958635 FLI1 JASPAR yes 22022544
chr2 27958625 27958635 GABPA JASPAR yes 22022545
chr2 27958625 27958635 ELK1 JASPAR yes 72587157
chr2 27958625 27958635 ELK3 JASPAR yes 72587158
chr2 27958625 27958635 ERF JASPAR yes 72587159
chr2 27958625 27958635 ERG JASPAR yes 72587160
chr2 27958625 27958635 ETS1 JASPAR yes 72587161
chr2 27958625 27958635 ETV1 JASPAR yes 72587162
chr2 27958625 27958635 ETV3 JASPAR yes 72587163
chr2 27958625 27958635 ETV4 JASPAR yes 72587164
chr2 27958625 27958635 ETV5 JASPAR yes 72587165
chr2 27958625 27958635 ETV6 JASPAR yes 72587166
chr2 27958625 27958635 FEV JASPAR yes 72587167
chr2 27958625 27958635 FLI1 JASPAR yes 72587168
chr2 27958625 27958635 GABPA JASPAR yes 72587169
chr2 27958625 27958638 ELF1 JASPAR yes 22022546
chr2 27958625 27958638 ELF1 JASPAR yes 72587170
chr2 27958626 27958635 ELK4 JASPAR yes 22022547
chr2 27958626 27958635 ELK4 JASPAR yes 72587171
chr2 27958627 27958633 ETS1 JASPAR yes 22022548
chr2 27958627 27958633 SPI1 JASPAR yes 22022549
chr2 27958627 27958633 ETS1 JASPAR yes 72587172
chr2 27958627 27958633 SPI1 JASPAR yes 72587173
chr2 27958627 27958637 ELK1 JASPAR yes 22022550
chr2 27958627 27958637 ELK1 JASPAR yes 72587174
chr2 27958641 27958646 SP1 TRANSFAC yes 22022551
chr2 27958641 27958646 SP1 TRANSFAC yes 72587175
chr2 27958641 27958647 SP1 TRANSFAC yes 22022552
chr2 27958641 27958647 SP1 TRANSFAC yes 72587176
chr2 27958644 27958658 PLAG1 JASPAR yes 22022553
chr2 27958644 27958658 PLAG1 JASPAR yes 72587177
chr2 27958653 27958658 ETS2 TRANSFAC yes 22022554
chr2 27958653 27958658 ETS2 TRANSFAC yes 72587178
chr2 27958662 27958672 SP1 JASPAR yes 22022555
chr2 27958662 27958672 SP1 JASPAR yes 72587179
chr2 27958663 27958671 SP1 TRANSFAC yes 22022556
chr2 27958663 27958671 SP1 TRANSFAC yes 72587180
chr2 27958664 27958669 SP1 TRANSFAC yes 22022557
chr2 27958664 27958669 SP1 TRANSFAC yes 72587181
chr2 27958665 27958670 SP1 TRANSFAC yes 22022558
chr2 27958665 27958670 SP1 TRANSFAC yes 72587182
chr2 27958665 27958671 SP1 TRANSFAC yes 22022559
chr2 27958665 27958671 SP1 TRANSFAC yes 72587183
chr2 27958666 27958674 SP1 TRANSFAC yes 22022560
chr2 27958666 27958674 WT1 TRANSFAC yes 22022561
chr2 27958666 27958674 SP1 TRANSFAC yes 72587184
chr2 27958666 27958674 WT1 TRANSFAC yes 72587185
chr2 27958668 27958675 SP1 TRANSFAC yes 22022562
chr2 27958668 27958675 SP1 TRANSFAC yes 72587186
chr2 27958670 27958675 SP1 TRANSFAC yes 22022563
chr2 27958670 27958675 SP1 TRANSFAC yes 72587187
chr2 27958681 27958691 GSC2 JASPAR yes 22022564
chr2 27958681 27958691 GSC JASPAR yes 22022565
chr2 27958681 27958691 GSC2 JASPAR yes 72587188
chr2 27958681 27958691 GSC JASPAR yes 72587189
chr2 27958682 27958690 OTX1 JASPAR yes 22022566
chr2 27958682 27958690 OTX2 JASPAR yes 22022567
chr2 27958682 27958690 OTX1 JASPAR yes 72587190
chr2 27958682 27958690 OTX2 JASPAR yes 72587191
chr2 27958695 27958707 YY1 JASPAR yes 22022568
chr2 27958695 27958707 YY1 JASPAR yes 72587192
SNP sites on vista30788[chr2:27958320-27958698]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 27958426 rs141520012 G A
E2F1 LFA1 POLR2A STAT1
5604043
chr2 27958569 rs72853212 C T
E2F1 EGR1 NFE2 POLR2A STAT1 STAT3
5604044
chr2 27958689 rs115453331 C G
E2F1 EGR1 GSC GSC2 OTX1 OTX2 POLR2A STAT1 STAT3
5604045
Genes possibly regulated by vista30788[chr2:27958320-27958698]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 27873679 27886676 - SUPT7L ENSG00000119760.11 27886676 0.6 1.0 2233 28356
chr2 27886338 27917840 + SLC4A1AP ENSG00000163798.9 27886338 0.55 0.99 2234 28018
chr2 27928653 27938599 - AC074091.13 ENSG00000205334.2 27938599 0.95 0.92 2235 80279
chr2 27994584 28210954 + MRPL33 ENSG00000243147.3 27994584 0.76 0.97 2236 64114
chr2 27998851 28009186 - AC110084.1 ENSG00000268656.1 28009186 0.0 1.0 2237 49512
Expression level of Genes
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miRNAs possibly regulated by vista30788[chr2:27958320-27958698]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results