EnhancerDB
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  3. rs115453331[chr2:27958689]
Enhancers that have rs115453331[chr2:27958689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr2 27958320 27958698 vista30788
VISTA
Transcript factors that have rs115453331[chr2:27958689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27958194 27958906 POLR2A UCSC Txn Factor no Conserved 108431544
chr2 27958339 27958780 STAT1 UCSC Txn Factor no Conserved 108431545
chr2 27958395 27959234 E2F1 UCSC Txn Factor no Conserved 108431546
chr2 27958432 27958694 STAT3 UCSC Txn Factor no Conserved 108431547
chr2 27958520 27958774 EGR1 UCSC Txn Factor no Conserved 108431548
chr2 27958681 27958691 GSC2 JASPAR yes 22022564
chr2 27958681 27958691 GSC JASPAR yes 22022565
chr2 27958681 27958691 GSC2 JASPAR yes 72587188
chr2 27958681 27958691 GSC JASPAR yes 72587189
chr2 27958682 27958690 OTX1 JASPAR yes 22022566
chr2 27958682 27958690 OTX2 JASPAR yes 22022567
chr2 27958682 27958690 OTX1 JASPAR yes 72587190
chr2 27958682 27958690 OTX2 JASPAR yes 72587191
Genes associated with rs115453331[chr2:27958689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More