EnhancerDB
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  3. vista3079[chr1:117281390-117281752]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3079[chr1:117281390-117281752]
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Tissue distribution of vista3079
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Transcription factor that possibly regulate vista3079[chr1:117281390-117281752]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117281383 117281787 RELA UCSC Txn Factor no Conserved 107824797
chr1 117281404 117281723 EBF1 UCSC Txn Factor no Conserved 107824799
chr1 117281380 117281393 NR2F1 JASPAR yes 31833960
chr1 117281380 117281393 NR2F1 JASPAR yes 118357729
chr1 117281384 117281392 CREB1 JASPAR yes 31833961
chr1 117281384 117281392 CREB1 JASPAR yes 118357730
chr1 117281401 117281416 LEF1 JASPAR yes 31833962
chr1 117281401 117281416 LEF1 JASPAR yes 118357731
chr1 117281406 117281412 SOX10 JASPAR yes 31833963
chr1 117281406 117281412 SOX10 JASPAR yes 118357732
chr1 117281412 117281416 YY1 TRANSFAC yes 31833964
chr1 117281412 117281416 YY1 TRANSFAC yes 118357733
chr1 117281422 117281440 SRF JASPAR yes 31833965
chr1 117281422 117281440 SRF JASPAR yes 118357734
chr1 117281434 117281448 IRF8 JASPAR yes 31833966
chr1 117281434 117281448 IRF8 JASPAR yes 118357735
chr1 117281451 117281471 TP63 JASPAR yes 31833967
chr1 117281451 117281471 TP63 JASPAR yes 118357736
chr1 117281452 117281470 TP53 JASPAR yes 31833968
chr1 117281452 117281470 TP63 JASPAR yes 31833969
chr1 117281452 117281470 TP73 JASPAR yes 31833970
chr1 117281452 117281470 TP53 JASPAR yes 118357737
chr1 117281452 117281470 TP63 JASPAR yes 118357738
chr1 117281452 117281470 TP73 JASPAR yes 118357739
chr1 117281453 117281468 TP53 JASPAR yes 31833971
chr1 117281453 117281468 TP53 JASPAR yes 118357740
chr1 117281506 117281521 STAT1 JASPAR yes 31833972
chr1 117281506 117281521 STAT1 JASPAR yes 118357741
chr1 117281508 117281519 STAT1 JASPAR yes 31833973
chr1 117281508 117281519 STAT1 JASPAR yes 118357742
chr1 117281509 117281525 ZNF143 JASPAR yes 31833974
chr1 117281509 117281525 ZNF143 JASPAR yes 118357743
chr1 117281518 117281528 TFEB JASPAR yes 31833975
chr1 117281518 117281528 TFEC JASPAR yes 31833976
chr1 117281518 117281528 TFEB JASPAR yes 118357744
chr1 117281518 117281528 TFEC JASPAR yes 118357745
chr1 117281565 117281580 MYBL2 JASPAR yes 31833977
chr1 117281565 117281580 MYBL2 JASPAR yes 118357746
chr1 117281571 117281585 PAX6 JASPAR yes 31833978
chr1 117281571 117281585 PAX6 JASPAR yes 118357747
chr1 117281572 117281575 MYB TRANSFAC yes 31833979
chr1 117281572 117281575 MYB TRANSFAC yes 118357748
chr1 117281581 117281591 NFKB1 JASPAR yes 31833980
chr1 117281581 117281591 RELA JASPAR yes 31833981
chr1 117281581 117281591 REL JASPAR yes 31833982
chr1 117281581 117281591 NFKB1 JASPAR yes 118357749
chr1 117281581 117281591 RELA JASPAR yes 118357750
chr1 117281581 117281591 REL JASPAR yes 118357751
chr1 117281581 117281592 NFKB1 JASPAR yes 31833983
chr1 117281581 117281592 NFKB1 JASPAR yes 118357752
chr1 117281581 117281598 RARA JASPAR yes 31833984
chr1 117281581 117281598 RARA JASPAR yes 118357753
chr1 117281582 117281592 RELA JASPAR yes 31833985
chr1 117281582 117281592 RELA JASPAR yes 118357754
chr1 117281584 117281599 HNF4A JASPAR yes 31833986
chr1 117281584 117281599 HNF4A JASPAR yes 118357755
chr1 117281588 117281598 RORA JASPAR yes 31833987
chr1 117281588 117281598 RORA JASPAR yes 118357756
chr1 117281589 117281600 ESRRA JASPAR yes 31833988
chr1 117281589 117281600 ESRRB JASPAR yes 31833989
chr1 117281589 117281600 ESRRA JASPAR yes 118357757
chr1 117281589 117281600 ESRRB JASPAR yes 118357758
chr1 117281591 117281599 NR4A2 JASPAR yes 31833990
chr1 117281591 117281599 NR4A2 JASPAR yes 118357759
chr1 117281593 117281597 ESR1 TRANSFAC yes 31833991
chr1 117281593 117281597 ESR1 TRANSFAC yes 118357760
chr1 117281606 117281616 ERG JASPAR yes 31833992
chr1 117281606 117281616 ERG JASPAR yes 118357761
chr1 117281608 117281613 GATA2 JASPAR yes 31833993
chr1 117281608 117281613 GATA2 JASPAR yes 118357762
chr1 117281655 117281659 NFE TRANSFAC yes 31833994
chr1 117281655 117281659 NFE TRANSFAC yes 118357763
chr1 117281662 117281678 ZNF143 JASPAR yes 31833995
chr1 117281662 117281678 ZNF143 JASPAR yes 118357764
chr1 117281664 117281679 RUNX2 JASPAR yes 31833996
chr1 117281664 117281679 RUNX2 JASPAR yes 118357765
chr1 117281667 117281673 SOX10 JASPAR yes 31833997
chr1 117281667 117281673 SOX10 JASPAR yes 118357766
chr1 117281667 117281681 GLIS2 JASPAR yes 31833998
chr1 117281667 117281681 GLIS3 JASPAR yes 31833999
chr1 117281667 117281681 GLIS2 JASPAR yes 118357767
chr1 117281667 117281681 GLIS3 JASPAR yes 118357768
chr1 117281673 117281684 E2F6 JASPAR yes 31834000
chr1 117281673 117281684 E2F6 JASPAR yes 118357769
chr1 117281674 117281679 SP1 TRANSFAC yes 31834001
chr1 117281674 117281679 SP1 TRANSFAC yes 118357770
chr1 117281676 117281687 NFKB1 JASPAR yes 31834002
chr1 117281676 117281687 NFKB1 JASPAR yes 118357771
chr1 117281677 117281682 ETS2 TRANSFAC yes 31834003
chr1 117281677 117281682 ETS2 TRANSFAC yes 118357772
chr1 117281677 117281687 RELA JASPAR yes 31834004
chr1 117281677 117281687 RELA JASPAR yes 118357773
chr1 117281686 117281701 FOXP1 JASPAR yes 31834005
chr1 117281686 117281701 FOXP1 JASPAR yes 118357774
chr1 117281686 117281707 IRF1 JASPAR yes 31834006
chr1 117281686 117281707 IRF1 JASPAR yes 118357775
chr1 117281687 117281694 SPIB JASPAR yes 31834007
chr1 117281687 117281694 SPIB JASPAR yes 118357776
chr1 117281690 117281704 STAT1 JASPAR yes 31834008
chr1 117281690 117281704 STAT1 JASPAR yes 118357777
chr1 117281690 117281705 STAT2 JASPAR yes 31834009
chr1 117281690 117281705 STAT2 JASPAR yes 118357778
chr1 117281719 117281733 GATA2 JASPAR yes 31834010
chr1 117281719 117281733 GATA2 JASPAR yes 118357779
chr1 117281721 117281728 GATA3 TRANSFAC yes 31834011
chr1 117281721 117281728 GATA3 TRANSFAC yes 118357780
chr1 117281721 117281729 GATA5 JASPAR yes 31834012
chr1 117281721 117281729 GATA5 JASPAR yes 118357781
chr1 117281722 117281732 TBR1 JASPAR yes 31834013
chr1 117281722 117281732 TBR1 JASPAR yes 118357782
chr1 117281724 117281727 MYB TRANSFAC yes 31834014
chr1 117281724 117281727 MYB TRANSFAC yes 118357783
chr1 117281724 117281732 MGA JASPAR yes 31834015
chr1 117281724 117281732 TBX15 JASPAR yes 31834016
chr1 117281724 117281732 TBX1 JASPAR yes 31834017
chr1 117281724 117281732 TBX4 JASPAR yes 31834018
chr1 117281724 117281732 TBX5 JASPAR yes 31834019
chr1 117281724 117281732 MGA JASPAR yes 118357784
chr1 117281724 117281732 TBX15 JASPAR yes 118357785
chr1 117281724 117281732 TBX1 JASPAR yes 118357786
chr1 117281724 117281732 TBX4 JASPAR yes 118357787
chr1 117281724 117281732 TBX5 JASPAR yes 118357788
chr1 117281724 117281736 PKNOX1 JASPAR yes 31834020
chr1 117281724 117281736 PKNOX2 JASPAR yes 31834021
chr1 117281724 117281736 TGIF2 JASPAR yes 31834022
chr1 117281724 117281736 PKNOX1 JASPAR yes 118357789
chr1 117281724 117281736 PKNOX2 JASPAR yes 118357790
chr1 117281724 117281736 TGIF2 JASPAR yes 118357791
chr1 117281725 117281735 SREBF2 JASPAR yes 31834023
chr1 117281725 117281735 SREBF2 JASPAR yes 118357792
chr1 117281726 117281735 SNAI2 JASPAR yes 31834024
chr1 117281726 117281735 SNAI2 JASPAR yes 118357793
chr1 117281727 117281732 USF2 TRANSFAC yes 31834025
chr1 117281727 117281732 USF2 TRANSFAC yes 118357794
chr1 117281733 117281739 SOX10 JASPAR yes 31834026
chr1 117281733 117281739 SOX10 JASPAR yes 118357795
chr1 117281736 117281741 ETS2 TRANSFAC yes 31834027
chr1 117281736 117281741 ETS2 TRANSFAC yes 118357796
SNP sites on vista3079[chr1:117281390-117281752]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117281482 rs7554054 T A
EBF1 RELA
591103
chr1 117281519 rs138222415 A G
EBF1 RELA STAT1 TFEB TFEC ZNF143
591104
chr1 117281729 rs561939006 A G
GATA2 GATA5 MGA PKNOX1 PKNOX2 RELA SNAI2 SREBF2 TBR1 TBX1 TBX15 TBX4 TBX5 TGIF2 USF2
591105
chr1 117281751 rs10923140 C G
RELA
591106
Genes possibly regulated by vista3079[chr1:117281390-117281752]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 28985
chr1 117236734 117249225 + C1orf137 ENSG00000203864.1 117236734 0.0 0.0 1063 55344
chr1 117297007 117311850 + CD2 ENSG00000116824.4 117297007 0.94 1.0 1064 84745
Expression level of Genes
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miRNAs possibly regulated by vista3079[chr1:117281390-117281752]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results