EnhancerDB
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  3. vista30806[chr2:28182324-28182658]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30806[chr2:28182324-28182658]
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Tissue distribution of vista30806
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Transcription factor that possibly regulate vista30806[chr2:28182324-28182658]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28182398 28182722 CEBPB UCSC Txn Factor no Conserved 108431568
chr2 28182323 28182329 GATA3 JASPAR yes 22023620
chr2 28182323 28182329 GATA3 JASPAR yes 72602987
chr2 28182340 28182357 RXRA JASPAR yes 22023621
chr2 28182340 28182357 RXRA JASPAR yes 72602988
chr2 28182356 28182377 IRF1 JASPAR yes 22023622
chr2 28182356 28182377 IRF1 JASPAR yes 72602989
chr2 28182358 28182373 PRDM1 JASPAR yes 22023623
chr2 28182358 28182373 PRDM1 JASPAR yes 72602990
chr2 28182360 28182364 YY1 TRANSFAC yes 22023624
chr2 28182360 28182364 YY1 TRANSFAC yes 72602991
chr2 28182364 28182379 PRDM1 JASPAR yes 22023625
chr2 28182364 28182379 PRDM1 JASPAR yes 72602992
chr2 28182377 28182381 NFE TRANSFAC yes 22023626
chr2 28182377 28182381 NFE TRANSFAC yes 72602993
chr2 28182378 28182389 USF1 JASPAR yes 22023627
chr2 28182378 28182389 USF2 JASPAR yes 22023628
chr2 28182378 28182389 USF1 JASPAR yes 72602994
chr2 28182378 28182389 USF2 JASPAR yes 72602995
chr2 28182379 28182389 TFEB JASPAR yes 22023629
chr2 28182379 28182389 TFEC JASPAR yes 22023630
chr2 28182379 28182389 TFEB JASPAR yes 72602996
chr2 28182379 28182389 TFEC JASPAR yes 72602997
chr2 28182388 28182403 MEF2C JASPAR yes 22023631
chr2 28182388 28182403 MEF2C JASPAR yes 72602998
chr2 28182391 28182395 YY1 TRANSFAC yes 22023632
chr2 28182391 28182395 YY1 TRANSFAC yes 72602999
chr2 28182391 28182402 FOXB1 JASPAR yes 22023633
chr2 28182391 28182402 FOXB1 JASPAR yes 72603000
chr2 28182391 28182403 POU2F1 JASPAR yes 22023634
chr2 28182391 28182403 POU2F1 JASPAR yes 72603001
chr2 28182399 28182403 YY1 TRANSFAC yes 22023635
chr2 28182399 28182403 YY1 TRANSFAC yes 72603002
chr2 28182399 28182410 CEBPB JASPAR yes 22023636
chr2 28182399 28182410 CEBPB JASPAR yes 72603003
chr2 28182410 28182431 IRF1 JASPAR yes 22023637
chr2 28182410 28182431 IRF1 JASPAR yes 72603004
chr2 28182411 28182426 FOXP1 JASPAR yes 22023638
chr2 28182411 28182426 FOXP1 JASPAR yes 72603005
chr2 28182412 28182423 FOXP2 JASPAR yes 22023639
chr2 28182412 28182423 FOXP2 JASPAR yes 72603006
chr2 28182412 28182427 STAT2 JASPAR yes 22023640
chr2 28182412 28182427 STAT2 JASPAR yes 72603007
chr2 28182413 28182428 FOXP1 JASPAR yes 22023641
chr2 28182413 28182428 FOXP1 JASPAR yes 72603008
chr2 28182418 28182433 FOXP1 JASPAR yes 22023642
chr2 28182418 28182433 FOXP1 JASPAR yes 72603009
chr2 28182432 28182449 ESR1 JASPAR yes 22023643
chr2 28182432 28182449 ESR1 JASPAR yes 72603010
chr2 28182432 28182450 ESR2 JASPAR yes 22023644
chr2 28182432 28182450 ESR2 JASPAR yes 72603011
chr2 28182433 28182448 ESR2 JASPAR yes 22023645
chr2 28182433 28182448 ESR2 JASPAR yes 72603012
chr2 28182433 28182453 ESR1 JASPAR yes 22023646
chr2 28182433 28182453 ESR1 JASPAR yes 72603013
chr2 28182440 28182451 ESRRA JASPAR yes 22023647
chr2 28182440 28182451 ESRRB JASPAR yes 22023648
chr2 28182440 28182451 ESRRA JASPAR yes 72603014
chr2 28182440 28182451 ESRRB JASPAR yes 72603015
chr2 28182441 28182449 NR4A2 JASPAR yes 22023649
chr2 28182441 28182449 NR4A2 JASPAR yes 72603016
chr2 28182441 28182456 HNF4A JASPAR yes 22023650
chr2 28182441 28182456 HNF4A JASPAR yes 72603017
chr2 28182445 28182455 NFIA JASPAR yes 22023651
chr2 28182445 28182455 NFIA JASPAR yes 72603018
chr2 28182446 28182455 NFIX JASPAR yes 22023652
chr2 28182446 28182455 NFIX JASPAR yes 72603019
chr2 28182447 28182453 NFIC JASPAR yes 22023653
chr2 28182447 28182453 NFIC JASPAR yes 72603020
chr2 28182457 28182477 RREB1 JASPAR yes 22023654
chr2 28182457 28182477 RREB1 JASPAR yes 72603021
chr2 28182458 28182476 TP63 JASPAR yes 22023655
chr2 28182458 28182476 TP73 JASPAR yes 22023656
chr2 28182458 28182476 TP63 JASPAR yes 72603022
chr2 28182458 28182476 TP73 JASPAR yes 72603023
chr2 28182471 28182486 FOXP1 JASPAR yes 22023657
chr2 28182471 28182486 FOXP1 JASPAR yes 72603024
chr2 28182478 28182499 ZNF263 JASPAR yes 22023658
chr2 28182478 28182499 ZNF263 JASPAR yes 72603025
chr2 28182479 28182500 ZNF263 JASPAR yes 22023659
chr2 28182479 28182500 ZNF263 JASPAR yes 72603026
chr2 28182482 28182503 ZNF263 JASPAR yes 22023660
chr2 28182482 28182503 ZNF263 JASPAR yes 72603027
chr2 28182493 28182508 STAT1 JASPAR yes 22023661
chr2 28182493 28182508 STAT1 JASPAR yes 72603028
chr2 28182495 28182506 STAT1 JASPAR yes 22023662
chr2 28182495 28182506 STAT3 JASPAR yes 22023663
chr2 28182495 28182506 STAT1 JASPAR yes 72603029
chr2 28182495 28182506 STAT3 JASPAR yes 72603030
chr2 28182523 28182526 MYB TRANSFAC yes 22023664
chr2 28182523 28182526 MYB TRANSFAC yes 72603031
chr2 28182529 28182537 MEIS2 JASPAR yes 22023665
chr2 28182529 28182537 MEIS3 JASPAR yes 22023666
chr2 28182529 28182537 MEIS2 JASPAR yes 72603032
chr2 28182529 28182537 MEIS3 JASPAR yes 72603033
chr2 28182530 28182534 NFE TRANSFAC yes 22023667
chr2 28182530 28182534 NFE TRANSFAC yes 72603034
chr2 28182548 28182553 H4TF1 TRANSFAC yes 22023668
chr2 28182548 28182553 H4TF1 TRANSFAC yes 72603035
chr2 28182549 28182557 FEV JASPAR yes 22023669
chr2 28182549 28182557 FEV JASPAR yes 72603036
chr2 28182551 28182556 ETS2 TRANSFAC yes 22023670
chr2 28182551 28182556 ETS2 TRANSFAC yes 72603037
chr2 28182557 28182561 NFE TRANSFAC yes 22023671
chr2 28182557 28182561 NFE TRANSFAC yes 72603038
chr2 28182564 28182576 DBP JASPAR yes 22023672
chr2 28182564 28182576 DBP JASPAR yes 72603039
chr2 28182565 28182575 CEBPB JASPAR yes 22023673
chr2 28182565 28182575 CEBPD JASPAR yes 22023674
chr2 28182565 28182575 CEBPE JASPAR yes 22023675
chr2 28182565 28182575 CEBPG JASPAR yes 22023676
chr2 28182565 28182575 CEBPB JASPAR yes 72603040
chr2 28182565 28182575 CEBPD JASPAR yes 72603041
chr2 28182565 28182575 CEBPE JASPAR yes 72603042
chr2 28182565 28182575 CEBPG JASPAR yes 72603043
chr2 28182575 28182586 STAT1 JASPAR yes 22023677
chr2 28182575 28182586 STAT3 JASPAR yes 22023678
chr2 28182575 28182586 STAT1 JASPAR yes 72603044
chr2 28182575 28182586 STAT3 JASPAR yes 72603045
chr2 28182588 28182601 ZBTB18 JASPAR yes 22023679
chr2 28182588 28182601 ZBTB18 JASPAR yes 72603046
chr2 28182589 28182599 MYF6 JASPAR yes 22023680
chr2 28182589 28182599 MYF6 JASPAR yes 72603047
chr2 28182594 28182598 NFE TRANSFAC yes 22023681
chr2 28182594 28182598 NFE TRANSFAC yes 72603048
chr2 28182598 28182604 SOX10 JASPAR yes 22023682
chr2 28182598 28182604 SOX10 JASPAR yes 72603049
chr2 28182605 28182611 LEF1 TRANSFAC yes 22023683
chr2 28182605 28182611 SOX10 JASPAR yes 22023684
chr2 28182605 28182611 LEF1 TRANSFAC yes 72603050
chr2 28182605 28182611 SOX10 JASPAR yes 72603051
chr2 28182624 28182628 YY1 TRANSFAC yes 22023685
chr2 28182624 28182628 YY1 TRANSFAC yes 72603052
chr2 28182632 28182636 NFE TRANSFAC yes 22023686
chr2 28182632 28182636 NFE TRANSFAC yes 72603053
chr2 28182644 28182656 YY1 JASPAR yes 22023687
chr2 28182644 28182656 YY1 JASPAR yes 72603054
chr2 28182649 28182653 YY1 TRANSFAC yes 22023688
chr2 28182649 28182653 YY1 TRANSFAC yes 72603055
SNP sites on vista30806[chr2:28182324-28182658]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28182367 rs114129346 A G
IRF1 PRDM1
5605072
chr2 28182412 rs148588357 TTC T
CEBPB FOXP1 FOXP2 IRF1 STAT2
5605073
chr2 28182412 rs375953454 TTC T
CEBPB FOXP1 FOXP2 IRF1 STAT2
5605074
chr2 28182519 rs148804469 G A
CEBPB
5605075
chr2 28182633 rs192037634 C T
CEBPB NFE
5605076
Genes possibly regulated by vista30806[chr2:28182324-28182658]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28004231 28113965 - RBKS ENSG00000171174.9 28113965 0.87 1.0 2238 31641
chr2 28112808 28561768 + BRE ENSG00000158019.16 28112808 0.9 0.99 2239 30484
Expression level of Genes
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miRNAs possibly regulated by vista30806[chr2:28182324-28182658]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results