EnhancerDB
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  3. rs375953454[chr2:28182412]
Enhancers that have rs375953454[chr2:28182412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 28182324 28182658 vista30806
VISTA
Transcript factors that have rs375953454[chr2:28182412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28182398 28182722 CEBPB UCSC Txn Factor no Conserved 108431568
chr2 28182410 28182431 IRF1 JASPAR yes 22023637
chr2 28182410 28182431 IRF1 JASPAR yes 72603004
chr2 28182411 28182426 FOXP1 JASPAR yes 22023638
chr2 28182411 28182426 FOXP1 JASPAR yes 72603005
chr2 28182412 28182423 FOXP2 JASPAR yes 22023639
chr2 28182412 28182423 FOXP2 JASPAR yes 72603006
chr2 28182412 28182427 STAT2 JASPAR yes 22023640
chr2 28182412 28182427 STAT2 JASPAR yes 72603007
Genes associated with rs375953454[chr2:28182412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More