EnhancerDB
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  3. vista30829[chr2:28589272-28589573]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30829[chr2:28589272-28589573]
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Tissue distribution of vista30829
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Transcription factor that possibly regulate vista30829[chr2:28589272-28589573]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28589213 28590404 POLR2A UCSC Txn Factor no Conserved 108431609
chr2 28589213 28590404 POLR2A UCSC Txn Factor no Conserved 108431610
chr2 28589291 28589795 REST UCSC Txn Factor no Conserved 108431611
chr2 28589291 28589795 REST UCSC Txn Factor no Conserved 108431612
chr2 28589457 28590007 GATA2 UCSC Txn Factor no Conserved 108431613
chr2 28589457 28590007 GATA2 UCSC Txn Factor no Conserved 108431614
chr2 28589542 28589987 GATA1 UCSC Txn Factor no Conserved 108431615
chr2 28589542 28589987 GATA1 UCSC Txn Factor no Conserved 108431616
chr2 28589565 28589929 TEAD4 UCSC Txn Factor no Conserved 108431617
chr2 28589565 28589929 TEAD4 UCSC Txn Factor no Conserved 108431618
chr2 28589286 28589294 FOXG1 JASPAR yes 22024738
chr2 28589286 28589294 FOXG1 JASPAR yes 72642572
chr2 28589291 28589301 POU6F2 JASPAR yes 22024739
chr2 28589291 28589301 POU6F2 JASPAR yes 72642573
chr2 28589295 28589299 YY1 TRANSFAC yes 22024740
chr2 28589295 28589299 YY1 TRANSFAC yes 72642574
chr2 28589300 28589307 MEIS1 JASPAR yes 22024741
chr2 28589300 28589307 MEIS1 JASPAR yes 72642575
chr2 28589300 28589308 MEIS2 JASPAR yes 22024742
chr2 28589300 28589308 MEIS3 JASPAR yes 22024743
chr2 28589300 28589308 MEIS2 JASPAR yes 72642576
chr2 28589300 28589308 MEIS3 JASPAR yes 72642577
chr2 28589301 28589313 PKNOX1 JASPAR yes 22024744
chr2 28589301 28589313 PKNOX2 JASPAR yes 22024745
chr2 28589301 28589313 TGIF1 JASPAR yes 22024746
chr2 28589301 28589313 TGIF2 JASPAR yes 22024747
chr2 28589301 28589313 PKNOX1 JASPAR yes 72642578
chr2 28589301 28589313 PKNOX2 JASPAR yes 72642579
chr2 28589301 28589313 TGIF1 JASPAR yes 72642580
chr2 28589301 28589313 TGIF2 JASPAR yes 72642581
chr2 28589329 28589340 ESRRA JASPAR yes 22024748
chr2 28589329 28589340 ESRRB JASPAR yes 22024749
chr2 28589329 28589340 ESRRA JASPAR yes 72642582
chr2 28589329 28589340 ESRRB JASPAR yes 72642583
chr2 28589345 28589356 USF1 JASPAR yes 22024750
chr2 28589345 28589356 USF1 JASPAR yes 72642584
chr2 28589346 28589357 USF2 JASPAR yes 22024751
chr2 28589346 28589357 USF2 JASPAR yes 72642585
chr2 28589355 28589367 GLI2 JASPAR yes 22024752
chr2 28589355 28589367 GLI2 JASPAR yes 72642586
chr2 28589385 28589404 RFX2 JASPAR yes 22024753
chr2 28589385 28589404 RFX2 JASPAR yes 72642587
chr2 28589398 28589419 ZNF263 JASPAR yes 22024754
chr2 28589398 28589419 ZNF263 JASPAR yes 72642588
chr2 28589411 28589416 SP1 TRANSFAC yes 22024755
chr2 28589411 28589416 SP1 TRANSFAC yes 72642589
chr2 28589427 28589437 NFATC3 JASPAR yes 22024756
chr2 28589427 28589437 NFATC3 JASPAR yes 72642590
chr2 28589429 28589437 FOXO3 JASPAR yes 22024757
chr2 28589429 28589437 FOXO3 JASPAR yes 72642591
chr2 28589434 28589449 ZIC3 JASPAR yes 22024758
chr2 28589434 28589449 ZIC4 JASPAR yes 22024759
chr2 28589434 28589449 ZIC3 JASPAR yes 72642592
chr2 28589434 28589449 ZIC4 JASPAR yes 72642593
chr2 28589435 28589449 GLIS2 JASPAR yes 22024760
chr2 28589435 28589449 ZIC1 JASPAR yes 22024761
chr2 28589435 28589449 GLIS2 JASPAR yes 72642594
chr2 28589435 28589449 ZIC1 JASPAR yes 72642595
chr2 28589442 28589456 PLAG1 JASPAR yes 22024762
chr2 28589442 28589456 PLAG1 JASPAR yes 72642596
chr2 28589442 28589463 ZNF263 JASPAR yes 22024763
chr2 28589442 28589463 ZNF263 JASPAR yes 72642597
chr2 28589444 28589448 LFA1 TRANSFAC yes 22024764
chr2 28589444 28589448 LFA1 TRANSFAC yes 72642598
chr2 28589469 28589477 MGA JASPAR yes 22024765
chr2 28589469 28589477 TBX15 JASPAR yes 22024766
chr2 28589469 28589477 TBX1 JASPAR yes 22024767
chr2 28589469 28589477 TBX4 JASPAR yes 22024768
chr2 28589469 28589477 TBX5 JASPAR yes 22024769
chr2 28589469 28589477 MGA JASPAR yes 72642599
chr2 28589469 28589477 TBX15 JASPAR yes 72642600
chr2 28589469 28589477 TBX1 JASPAR yes 72642601
chr2 28589469 28589477 TBX4 JASPAR yes 72642602
chr2 28589469 28589477 TBX5 JASPAR yes 72642603
chr2 28589481 28589486 NFY TRANSFAC yes 22024770
chr2 28589481 28589486 NFY TRANSFAC yes 72642604
chr2 28589512 28589526 GATA2 JASPAR yes 22024771
chr2 28589512 28589526 GATA2 JASPAR yes 72642605
chr2 28589514 28589520 GATA1 TRANSFAC yes 22024772
chr2 28589514 28589520 GATA1 TRANSFAC yes 72642606
chr2 28589514 28589522 GATA5 JASPAR yes 22024773
chr2 28589514 28589522 GATA5 JASPAR yes 72642607
chr2 28589526 28589531 SP1 TRANSFAC yes 22024774
chr2 28589526 28589531 SP1 TRANSFAC yes 72642608
chr2 28589532 28589549 RARA JASPAR yes 22024775
chr2 28589532 28589549 RXRA JASPAR yes 22024776
chr2 28589532 28589549 RARA JASPAR yes 72642609
chr2 28589532 28589549 RXRA JASPAR yes 72642610
chr2 28589551 28589572 REST JASPAR yes 22024777
chr2 28589551 28589572 REST JASPAR yes 72642611
chr2 28589552 28589571 REST JASPAR yes 22024778
chr2 28589552 28589571 REST JASPAR yes 72642612
chr2 28589564 28589578 MTF1 JASPAR yes 22024779
chr2 28589564 28589578 MTF1 JASPAR yes 72642613
SNP sites on vista30829[chr2:28589272-28589573]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28589360 rs35126720 G A
GLI2 POLR2A REST
5608142
chr2 28589392 rs561855584 T G
POLR2A REST RFX2
5608143
chr2 28589441 rs6547848 C T
GLIS2 POLR2A REST ZIC1 ZIC3 ZIC4
5608144
chr2 28589466 rs142992236 G T
GATA2 POLR2A REST
5608145
Genes possibly regulated by vista30829[chr2:28589272-28589573]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28615315 28640179 + FOSL2 ENSG00000075426.7 28615315 0.77 1.0 2240 74258
chr2 28680012 28866654 + PLB1 ENSG00000163803.8 28680012 0.79 0.99 2241 9561
Expression level of Genes
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miRNAs possibly regulated by vista30829[chr2:28589272-28589573]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results