EnhancerDB
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  3. rs6547848[chr2:28589441]
Enhancers that have rs6547848[chr2:28589441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr2 28589272 28589573 vista30829
VISTA
Transcript factors that have rs6547848[chr2:28589441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28589213 28590404 POLR2A UCSC Txn Factor no Conserved 108431609
chr2 28589213 28590404 POLR2A UCSC Txn Factor no Conserved 108431610
chr2 28589291 28589795 REST UCSC Txn Factor no Conserved 108431611
chr2 28589291 28589795 REST UCSC Txn Factor no Conserved 108431612
chr2 28589434 28589449 ZIC3 JASPAR yes 22024758
chr2 28589434 28589449 ZIC4 JASPAR yes 22024759
chr2 28589434 28589449 ZIC3 JASPAR yes 72642592
chr2 28589434 28589449 ZIC4 JASPAR yes 72642593
chr2 28589435 28589449 GLIS2 JASPAR yes 22024760
chr2 28589435 28589449 ZIC1 JASPAR yes 22024761
chr2 28589435 28589449 GLIS2 JASPAR yes 72642594
chr2 28589435 28589449 ZIC1 JASPAR yes 72642595
Genes associated with rs6547848[chr2:28589441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More