EnhancerDB
  1. Home
  2. Enhancers
  3. vista3087[chr1:117421623-117422020]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3087[chr1:117421623-117422020]
Back to top
Tissue distribution of vista3087
Back to top
Transcription factor that possibly regulate vista3087[chr1:117421623-117422020]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117421581 117422257 KAP1 UCSC Txn Factor no Conserved 107825114
chr1 117421685 117422155 GATA3 UCSC Txn Factor no Conserved 107825117
chr1 117421619 117421630 EBF1 JASPAR yes 31848020
chr1 117421619 117421630 EBF1 JASPAR yes 118358074
chr1 117421623 117421628 TFAP2A TRANSFAC yes 31848021
chr1 117421623 117421628 TFAP2A TRANSFAC yes 118358075
chr1 117421623 117421629 MZF1 JASPAR yes 31848022
chr1 117421623 117421629 MZF1 JASPAR yes 118358076
chr1 117421644 117421648 LFA1 TRANSFAC yes 31848023
chr1 117421644 117421648 LFA1 TRANSFAC yes 118358077
chr1 117421649 117421665 SOX8 JASPAR yes 31848024
chr1 117421649 117421665 SOX8 JASPAR yes 118358078
chr1 117421680 117421691 NFKB1 JASPAR yes 31848025
chr1 117421680 117421691 NFKB1 JASPAR yes 118358079
chr1 117421681 117421691 NFKB1 JASPAR yes 31848026
chr1 117421681 117421691 NFKB1 JASPAR yes 118358080
chr1 117421688 117421698 SP1 JASPAR yes 31848027
chr1 117421688 117421698 SP1 JASPAR yes 118358081
chr1 117421688 117421702 SPI1 JASPAR yes 31848028
chr1 117421688 117421702 SPI1 JASPAR yes 118358082
chr1 117421697 117421708 STAT3 JASPAR yes 31848029
chr1 117421697 117421708 STAT3 JASPAR yes 118358083
chr1 117421698 117421713 HSF1 JASPAR yes 31848030
chr1 117421698 117421713 HSF1 JASPAR yes 118358084
chr1 117421702 117421714 NHLH1 JASPAR yes 31848031
chr1 117421702 117421714 NHLH1 JASPAR yes 118358085
chr1 117421703 117421713 NHLH1 JASPAR yes 31848032
chr1 117421703 117421713 NHLH1 JASPAR yes 118358086
chr1 117421713 117421734 ZNF263 JASPAR yes 31848033
chr1 117421713 117421734 ZNF263 JASPAR yes 118358087
chr1 117421714 117421735 ZNF263 JASPAR yes 31848034
chr1 117421714 117421735 ZNF263 JASPAR yes 118358088
chr1 117421715 117421726 E2F6 JASPAR yes 31848035
chr1 117421715 117421726 E2F6 JASPAR yes 118358089
chr1 117421717 117421738 ZNF263 JASPAR yes 31848036
chr1 117421717 117421738 ZNF263 JASPAR yes 118358090
chr1 117421720 117421741 ZNF263 JASPAR yes 31848037
chr1 117421720 117421741 ZNF263 JASPAR yes 118358091
chr1 117421724 117421734 SP1 JASPAR yes 31848038
chr1 117421724 117421734 SP1 JASPAR yes 118358092
chr1 117421765 117421786 ZNF263 JASPAR yes 31848039
chr1 117421765 117421786 ZNF263 JASPAR yes 118358093
chr1 117421767 117421778 E2F6 JASPAR yes 31848040
chr1 117421767 117421778 E2F6 JASPAR yes 118358094
chr1 117421768 117421789 ZNF263 JASPAR yes 31848041
chr1 117421768 117421789 ZNF263 JASPAR yes 118358095
chr1 117421770 117421785 PRDM1 JASPAR yes 31848042
chr1 117421770 117421785 PRDM1 JASPAR yes 118358096
chr1 117421773 117421784 E2F6 JASPAR yes 31848043
chr1 117421773 117421784 E2F6 JASPAR yes 118358097
chr1 117421774 117421795 ZNF263 JASPAR yes 31848044
chr1 117421774 117421795 ZNF263 JASPAR yes 118358098
chr1 117421789 117421795 YY1 JASPAR yes 31848045
chr1 117421789 117421795 YY1 JASPAR yes 118358099
chr1 117421796 117421805 THAP1 JASPAR yes 31848046
chr1 117421796 117421805 THAP1 JASPAR yes 118358100
chr1 117421803 117421822 REST JASPAR yes 31848047
chr1 117421803 117421822 REST JASPAR yes 118358101
chr1 117421806 117421810 NFE TRANSFAC yes 31848048
chr1 117421806 117421810 NFE TRANSFAC yes 118358102
chr1 117421806 117421811 GATA1 TRANSFAC yes 31848049
chr1 117421806 117421811 GATA1 TRANSFAC yes 118358103
chr1 117421806 117421812 GATA3 JASPAR yes 31848050
chr1 117421806 117421812 GATA3 JASPAR yes 118358104
chr1 117421812 117421816 LFA1 TRANSFAC yes 31848051
chr1 117421812 117421816 LFA1 TRANSFAC yes 118358105
chr1 117421813 117421823 NEUROG2 JASPAR yes 31848052
chr1 117421813 117421823 NEUROG2 JASPAR yes 118358106
chr1 117421835 117421847 FOXI1 JASPAR yes 31848053
chr1 117421835 117421847 FOXI1 JASPAR yes 118358107
chr1 117421842 117421846 YY1 TRANSFAC yes 31848054
chr1 117421842 117421846 YY1 TRANSFAC yes 118358108
chr1 117421859 117421863 NFE TRANSFAC yes 31848055
chr1 117421859 117421863 NFE TRANSFAC yes 118358109
chr1 117421928 117421948 TP53 JASPAR yes 31848056
chr1 117421928 117421948 TP53 JASPAR yes 118358110
chr1 117421930 117421950 TP63 JASPAR yes 31848057
chr1 117421930 117421950 TP63 JASPAR yes 118358111
chr1 117421931 117421949 TP53 JASPAR yes 31848058
chr1 117421931 117421949 TP63 JASPAR yes 31848059
chr1 117421931 117421949 TP73 JASPAR yes 31848060
chr1 117421931 117421949 TP53 JASPAR yes 118358112
chr1 117421931 117421949 TP63 JASPAR yes 118358113
chr1 117421931 117421949 TP73 JASPAR yes 118358114
chr1 117421932 117421947 TP53 JASPAR yes 31848061
chr1 117421932 117421947 TP53 JASPAR yes 118358115
chr1 117421932 117421952 TP53 JASPAR yes 31848062
chr1 117421932 117421952 TP53 JASPAR yes 118358116
chr1 117421933 117421948 TP53 JASPAR yes 31848063
chr1 117421933 117421948 TP53 JASPAR yes 118358117
chr1 117421956 117421969 ELF1 JASPAR yes 31848064
chr1 117421956 117421969 ELF1 JASPAR yes 118358118
chr1 117421959 117421965 PEA3 TRANSFAC yes 31848065
chr1 117421959 117421965 PEA3 TRANSFAC yes 118358119
chr1 117421959 117421970 ELK4 JASPAR yes 31848066
chr1 117421959 117421970 FLI1 JASPAR yes 31848067
chr1 117421959 117421970 ELK4 JASPAR yes 118358120
chr1 117421959 117421970 FLI1 JASPAR yes 118358121
chr1 117421959 117421980 ZNF263 JASPAR yes 31848068
chr1 117421959 117421980 ZNF263 JASPAR yes 118358122
chr1 117421960 117421981 ZNF263 JASPAR yes 31848069
chr1 117421960 117421981 ZNF263 JASPAR yes 118358123
chr1 117421970 117421984 TLX1 JASPAR yes 31848070
chr1 117421970 117421984 TLX1 JASPAR yes 118358124
chr1 117421988 117421999 EBF1 JASPAR yes 31848071
chr1 117421988 117421999 EBF1 JASPAR yes 118358125
chr1 117421999 117422014 PRDM1 JASPAR yes 31848072
chr1 117421999 117422014 PRDM1 JASPAR yes 118358126
SNP sites on vista3087[chr1:117421623-117422020]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117421624 rs145658683 T C
EBF1 KAP1 MZF1 TFAP2A
592326
chr1 117421706 rs57797640 C A
GATA3 HSF1 KAP1 NHLH1 STAT3
592327
chr1 117421775 rs115795189 T A
E2F6 GATA3 KAP1 PRDM1 ZNF263
592328
chr1 117421804 rs9659640 T A,C
GATA3 KAP1 REST THAP1
592329
chr1 117421837 rs138468425 T C
FOXI1 GATA3 KAP1
592330
chr1 117421891 rs11590292 C T
GATA3 KAP1
592331
chr1 117422001 rs141453333 A G
GATA3 KAP1 PRDM1
592332
Genes possibly regulated by vista3087[chr1:117421623-117422020]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117452679 117532980 + PTGFRN ENSG00000134247.9 117452679 0.83 1.0 1065 69341
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3087[chr1:117421623-117422020]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results