EnhancerDB
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  3. vista3088[chr1:117422443-117422644]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3088[chr1:117422443-117422644]
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Tissue distribution of vista3088
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Transcription factor that possibly regulate vista3088[chr1:117422443-117422644]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117422384 117422733 ESR1 UCSC Txn Factor no Conserved 107825128
chr1 117422461 117422674 GATA3 UCSC Txn Factor no Conserved 107825129
chr1 117422484 117422681 FOXA1 UCSC Txn Factor no Conserved 107825130
chr1 117422434 117422449 HSF1 JASPAR yes 31848110
chr1 117422434 117422449 HSF1 JASPAR yes 118358127
chr1 117422435 117422448 HSF2 JASPAR yes 31848111
chr1 117422435 117422448 HSF2 JASPAR yes 118358128
chr1 117422439 117422450 STAT3 JASPAR yes 31848112
chr1 117422439 117422450 STAT3 JASPAR yes 118358129
chr1 117422441 117422451 NFATC3 JASPAR yes 31848113
chr1 117422441 117422451 NFATC3 JASPAR yes 118358130
chr1 117422443 117422450 NFATC2 JASPAR yes 31848114
chr1 117422443 117422450 NFATC2 JASPAR yes 118358131
chr1 117422455 117422460 ETS2 TRANSFAC yes 31848115
chr1 117422455 117422460 ETS2 TRANSFAC yes 118358132
chr1 117422472 117422478 ESR1 TRANSFAC yes 31848116
chr1 117422472 117422478 ESR1 TRANSFAC yes 118358133
chr1 117422474 117422478 ESR1 TRANSFAC yes 31848117
chr1 117422474 117422478 ESR1 TRANSFAC yes 118358134
chr1 117422479 117422483 NFE TRANSFAC yes 31848118
chr1 117422479 117422483 NFE TRANSFAC yes 118358135
chr1 117422479 117422486 MEIS1 JASPAR yes 31848119
chr1 117422479 117422486 MEIS1 JASPAR yes 118358136
chr1 117422496 117422503 SPIB JASPAR yes 31848120
chr1 117422496 117422503 SPIB JASPAR yes 118358137
chr1 117422505 117422526 IRF1 JASPAR yes 31848121
chr1 117422505 117422526 IRF1 JASPAR yes 118358138
chr1 117422507 117422522 STAT2 JASPAR yes 31848122
chr1 117422507 117422522 STAT2 JASPAR yes 118358139
chr1 117422510 117422525 FOXP1 JASPAR yes 31848123
chr1 117422510 117422525 FOXP1 JASPAR yes 118358140
chr1 117422511 117422526 FOXP1 JASPAR yes 31848124
chr1 117422511 117422526 FOXP1 JASPAR yes 118358141
chr1 117422512 117422527 FOXP1 JASPAR yes 31848125
chr1 117422512 117422527 FOXP1 JASPAR yes 118358142
chr1 117422530 117422544 CREB3L1 JASPAR yes 31848126
chr1 117422530 117422544 CREB3L1 JASPAR yes 118358143
chr1 117422530 117422545 RUNX2 JASPAR yes 31848127
chr1 117422530 117422545 RUNX2 JASPAR yes 118358144
chr1 117422538 117422550 TFAP2A JASPAR yes 31848128
chr1 117422538 117422550 TFAP2B JASPAR yes 31848129
chr1 117422538 117422550 TFAP2C JASPAR yes 31848130
chr1 117422538 117422550 TFAP2A JASPAR yes 118358145
chr1 117422538 117422550 TFAP2B JASPAR yes 118358146
chr1 117422538 117422550 TFAP2C JASPAR yes 118358147
chr1 117422545 117422549 LFA1 TRANSFAC yes 31848131
chr1 117422545 117422549 LFA1 TRANSFAC yes 118358148
chr1 117422545 117422555 MAX JASPAR yes 31848132
chr1 117422545 117422555 MAX JASPAR yes 118358149
chr1 117422545 117422556 USF2 JASPAR yes 31848133
chr1 117422545 117422556 USF2 JASPAR yes 118358150
chr1 117422545 117422557 HES5 JASPAR yes 31848134
chr1 117422545 117422557 HES5 JASPAR yes 118358151
chr1 117422557 117422562 GATA2 JASPAR yes 31848135
chr1 117422557 117422562 GATA2 JASPAR yes 118358152
chr1 117422558 117422564 ZNF354C JASPAR yes 31848136
chr1 117422558 117422564 ZNF354C JASPAR yes 118358153
chr1 117422566 117422570 TEAD2 TRANSFAC yes 31848137
chr1 117422566 117422570 TEAD2 TRANSFAC yes 118358154
chr1 117422576 117422594 NR3C1 JASPAR yes 31848138
chr1 117422576 117422594 NR3C1 JASPAR yes 118358155
chr1 117422580 117422584 H1TF2 TRANSFAC yes 31848139
chr1 117422580 117422584 NFE TRANSFAC yes 31848140
chr1 117422580 117422584 SRF TRANSFAC yes 31848141
chr1 117422580 117422584 H1TF2 TRANSFAC yes 118358156
chr1 117422580 117422584 NFE TRANSFAC yes 118358157
chr1 117422580 117422584 SRF TRANSFAC yes 118358158
chr1 117422580 117422595 FOXA1 JASPAR yes 31848142
chr1 117422580 117422595 FOXA1 JASPAR yes 118358159
chr1 117422582 117422594 FOXC2 JASPAR yes 31848143
chr1 117422582 117422594 FOXC2 JASPAR yes 118358160
chr1 117422583 117422594 FOXB1 JASPAR yes 31848144
chr1 117422583 117422594 FOXC1 JASPAR yes 31848145
chr1 117422583 117422594 FOXB1 JASPAR yes 118358161
chr1 117422583 117422594 FOXC1 JASPAR yes 118358162
chr1 117422584 117422588 YY1 TRANSFAC yes 31848146
chr1 117422584 117422588 YY1 TRANSFAC yes 118358163
chr1 117422625 117422629 YY1 TRANSFAC yes 31848147
chr1 117422625 117422629 YY1 TRANSFAC yes 118358164
chr1 117422642 117422662 TP63 JASPAR yes 31848148
chr1 117422642 117422662 TP63 JASPAR yes 118358165
chr1 117422643 117422661 TP53 JASPAR yes 31848149
chr1 117422643 117422661 TP53 JASPAR yes 118358166
SNP sites on vista3088[chr1:117422443-117422644]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117422457 rs4489597 G A
ESR1 ETS2
592340
chr1 117422458 rs4489598 G A
ESR1 ETS2
592341
chr1 117422514 rs370164118 T G
ESR1 FOXA1 FOXP1 GATA3 IRF1 STAT2
592342
chr1 117422641 rs4322262 T C
ESR1 FOXA1 GATA3
592343
Genes possibly regulated by vista3088[chr1:117422443-117422644]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117452679 117532980 + PTGFRN ENSG00000134247.9 117452679 0.83 1.0 1065 69965
Expression level of Genes
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miRNAs possibly regulated by vista3088[chr1:117422443-117422644]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results