EnhancerDB
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  3. vista31064[chr2:38060614-38060898]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31064[chr2:38060614-38060898]
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Tissue distribution of vista31064
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Transcription factor that possibly regulate vista31064[chr2:38060614-38060898]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 38060619 38060633 MTF1 JASPAR yes 22035698
chr2 38060619 38060633 MTF1 JASPAR yes 73089319
chr2 38060628 38060643 RFX5 JASPAR yes 22035699
chr2 38060628 38060643 RFX5 JASPAR yes 73089320
chr2 38060638 38060643 GATA2 JASPAR yes 22035700
chr2 38060638 38060643 GATA2 JASPAR yes 73089321
chr2 38060655 38060661 HiNF-A TRANSFAC yes 22035701
chr2 38060655 38060661 HiNF-A TRANSFAC yes 73089322
chr2 38060657 38060668 YY2 JASPAR yes 22035702
chr2 38060657 38060668 YY2 JASPAR yes 73089323
chr2 38060668 38060684 SRF JASPAR yes 22035703
chr2 38060668 38060684 SRF JASPAR yes 73089324
chr2 38060668 38060686 SRF JASPAR yes 22035704
chr2 38060668 38060686 SRF JASPAR yes 73089325
chr2 38060671 38060683 SRF JASPAR yes 22035705
chr2 38060671 38060683 SRF JASPAR yes 73089326
chr2 38060674 38060678 YY1 TRANSFAC yes 22035706
chr2 38060674 38060678 YY1 TRANSFAC yes 73089327
chr2 38060679 38060683 ESR1 TRANSFAC yes 22035707
chr2 38060679 38060683 ESR1 TRANSFAC yes 73089328
chr2 38060679 38060693 JUN JASPAR yes 22035708
chr2 38060679 38060693 JUN JASPAR yes 73089329
chr2 38060683 38060694 FOS JASPAR yes 22035709
chr2 38060683 38060694 FOSL1 JASPAR yes 22035710
chr2 38060683 38060694 JUND JASPAR yes 22035711
chr2 38060683 38060694 NFE2 JASPAR yes 22035712
chr2 38060683 38060694 FOS JASPAR yes 73089330
chr2 38060683 38060694 FOSL1 JASPAR yes 73089331
chr2 38060683 38060694 JUND JASPAR yes 73089332
chr2 38060683 38060694 NFE2 JASPAR yes 73089333
chr2 38060684 38060692 JUND TRANSFAC yes 22035713
chr2 38060684 38060692 JUND TRANSFAC yes 73089334
chr2 38060684 38060693 JDP2 JASPAR yes 22035714
chr2 38060684 38060693 JDP2 JASPAR yes 73089335
chr2 38060684 38060695 JUNB JASPAR yes 22035715
chr2 38060684 38060695 JUNB JASPAR yes 73089336
chr2 38060684 38060698 JUN JASPAR yes 22035716
chr2 38060684 38060698 JUN JASPAR yes 73089337
chr2 38060685 38060691 JUN TRANSFAC yes 22035717
chr2 38060685 38060691 JUN TRANSFAC yes 73089338
chr2 38060696 38060702 MZF1 JASPAR yes 22035718
chr2 38060696 38060702 MZF1 JASPAR yes 73089339
chr2 38060723 38060740 ZNF410 JASPAR yes 22035719
chr2 38060723 38060740 ZNF410 JASPAR yes 73089340
chr2 38060744 38060759 RUNX2 JASPAR yes 22035720
chr2 38060744 38060759 RUNX2 JASPAR yes 73089341
chr2 38060747 38060758 RUNX1 JASPAR yes 22035721
chr2 38060747 38060758 RUNX1 JASPAR yes 73089342
chr2 38060748 38060758 RUNX3 JASPAR yes 22035722
chr2 38060748 38060758 RUNX3 JASPAR yes 73089343
chr2 38060749 38060758 RUNX2 JASPAR yes 22035723
chr2 38060749 38060758 RUNX2 JASPAR yes 73089344
chr2 38060767 38060771 YY1 TRANSFAC yes 22035724
chr2 38060767 38060771 YY1 TRANSFAC yes 73089345
chr2 38060783 38060793 REL JASPAR yes 22035725
chr2 38060783 38060793 REL JASPAR yes 73089346
chr2 38060783 38060794 NFKB1 JASPAR yes 22035726
chr2 38060783 38060794 NFKB1 JASPAR yes 73089347
chr2 38060786 38060791 H4TF1 TRANSFAC yes 22035727
chr2 38060786 38060791 H4TF1 TRANSFAC yes 73089348
chr2 38060836 38060843 PEA3 TRANSFAC yes 22035728
chr2 38060836 38060843 PEA3 TRANSFAC yes 73089349
chr2 38060844 38060854 SP1 JASPAR yes 22035729
chr2 38060844 38060854 ZNF740 JASPAR yes 22035730
chr2 38060844 38060854 SP1 JASPAR yes 73089350
chr2 38060844 38060854 ZNF740 JASPAR yes 73089351
chr2 38060846 38060852 MAZ TRANSFAC yes 22035731
chr2 38060846 38060852 MAZ TRANSFAC yes 73089352
chr2 38060850 38060863 ELF1 JASPAR yes 22035732
chr2 38060850 38060863 ELF1 JASPAR yes 73089353
chr2 38060850 38060871 ZNF263 JASPAR yes 22035733
chr2 38060850 38060871 ZNF263 JASPAR yes 73089354
chr2 38060851 38060855 LFA1 TRANSFAC yes 22035734
chr2 38060851 38060855 LFA1 TRANSFAC yes 73089355
chr2 38060853 38060863 GABPA JASPAR yes 22035735
chr2 38060853 38060863 GABPA JASPAR yes 73089356
chr2 38060856 38060877 ZNF263 JASPAR yes 22035736
chr2 38060856 38060877 ZNF263 JASPAR yes 73089357
chr2 38060871 38060880 HiNF-C TRANSFAC yes 22035737
chr2 38060871 38060880 HiNF-C TRANSFAC yes 73089358
chr2 38060871 38060881 SP1 JASPAR yes 22035738
chr2 38060871 38060881 SP1 JASPAR yes 73089359
chr2 38060872 38060878 SP1 TRANSFAC yes 22035739
chr2 38060872 38060878 SP1 TRANSFAC yes 73089360
chr2 38060873 38060878 SP1 TRANSFAC yes 22035740
chr2 38060873 38060878 SP1 TRANSFAC yes 73089361
chr2 38060874 38060879 SP1 TRANSFAC yes 22035741
chr2 38060874 38060879 SP1 TRANSFAC yes 73089362
chr2 38060874 38060880 SP1 TRANSFAC yes 22035742
chr2 38060874 38060880 SP1 TRANSFAC yes 73089363
chr2 38060884 38060888 NFE TRANSFAC yes 22035743
chr2 38060884 38060888 NFE TRANSFAC yes 73089364
chr2 38060885 38060897 PKNOX1 JASPAR yes 22035744
chr2 38060885 38060897 TGIF1 JASPAR yes 22035745
chr2 38060885 38060897 TGIF2 JASPAR yes 22035746
chr2 38060885 38060897 PKNOX1 JASPAR yes 73089365
chr2 38060885 38060897 TGIF1 JASPAR yes 73089366
chr2 38060885 38060897 TGIF2 JASPAR yes 73089367
chr2 38060885 38060903 IRF2 JASPAR yes 22035747
chr2 38060885 38060903 IRF2 JASPAR yes 73089368
chr2 38060886 38060907 IRF1 JASPAR yes 22035748
chr2 38060886 38060907 IRF1 JASPAR yes 73089369
chr2 38060888 38060903 STAT2 JASPAR yes 22035749
chr2 38060888 38060903 STAT2 JASPAR yes 73089370
chr2 38060889 38060903 STAT1 JASPAR yes 22035750
chr2 38060889 38060903 STAT1 JASPAR yes 73089371
chr2 38060890 38060902 IRF1 JASPAR yes 22035751
chr2 38060890 38060902 IRF1 JASPAR yes 73089372
chr2 38060890 38060904 IRF7 JASPAR yes 22035752
chr2 38060890 38060904 IRF8 JASPAR yes 22035753
chr2 38060890 38060904 IRF7 JASPAR yes 73089373
chr2 38060890 38060904 IRF8 JASPAR yes 73089374
chr2 38060890 38060905 IRF9 JASPAR yes 22035754
chr2 38060890 38060905 IRF9 JASPAR yes 73089375
chr2 38060898 38060908 MZF1 JASPAR yes 22035755
chr2 38060898 38060908 MZF1 JASPAR yes 73089376
SNP sites on vista31064[chr2:38060614-38060898]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 38060632 rs13417236 G A
MTF1 RFX5
5655618
chr2 38060635 rs1430015 G C
RFX5
5655619
chr2 38060646 rs1430016 A G no 5655620
chr2 38060651 rs1430017 C A no 5655621
chr2 38060671 rs143455868 T C,G
SRF
5655622
chr2 38060676 rs146248892 A G
SRF YY1
5655623
chr2 38060784 rs74177071 G A
NFKB1 REL
5655624
chr2 38060785 rs11304067 GT G
NFKB1 REL
5655625
chr2 38060795 rs55915149 A G no 5655626
chr2 38060827 rs12712555 C G no 5655627
chr2 38060836 rs113427836 C T
PEA3
5655628
chr2 38060883 rs544064811 T C no 5655629
chr2 38060887 rs13005878 G C,T
IRF1 IRF2 NFE PKNOX1 TGIF1 TGIF2
5655630
chr2 38060893 rs13031750 T C
IRF1 IRF2 IRF7 IRF8 IRF9 PKNOX1 STAT1 STAT2 TGIF1 TGIF2
5655631
Genes possibly regulated by vista31064[chr2:38060614-38060898]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 37869032 37965611 - CDC42EP3 ENSG00000163171.6 37965611 0.74 1.0 2284 4997
chr2 38150330 38294285 + RMDN2 ENSG00000115841.15 38150330 0.76 0.97 2285 10568
Expression level of Genes
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miRNAs possibly regulated by vista31064[chr2:38060614-38060898]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results