EnhancerDB
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  3. rs13005878[chr2:38060887]
Enhancers that have rs13005878[chr2:38060887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38052411 38068019 enh33229
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Lung (A549) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr2 38060614 38060898 vista31064
VISTA
Transcript factors that have rs13005878[chr2:38060887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38060884 38060888 NFE TRANSFAC yes 22035743
chr2 38060884 38060888 NFE TRANSFAC yes 73089364
chr2 38060885 38060897 PKNOX1 JASPAR yes 22035744
chr2 38060885 38060897 TGIF1 JASPAR yes 22035745
chr2 38060885 38060897 TGIF2 JASPAR yes 22035746
chr2 38060885 38060897 PKNOX1 JASPAR yes 73089365
chr2 38060885 38060897 TGIF1 JASPAR yes 73089366
chr2 38060885 38060897 TGIF2 JASPAR yes 73089367
chr2 38060885 38060903 IRF2 JASPAR yes 22035747
chr2 38060885 38060903 IRF2 JASPAR yes 73089368
chr2 38060886 38060907 IRF1 JASPAR yes 22035748
chr2 38060886 38060907 IRF1 JASPAR yes 73089369
Genes associated with rs13005878[chr2:38060887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More