EnhancerDB
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  3. vista328[chr1:10558276-10558621]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista328[chr1:10558276-10558621]
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Tissue distribution of vista328
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Transcription factor that possibly regulate vista328[chr1:10558276-10558621]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10558288 10558298 SREBF1 JASPAR yes 26717539
chr1 10558288 10558298 SREBF2 JASPAR yes 26717540
chr1 10558288 10558298 SREBF1 JASPAR yes 118228614
chr1 10558288 10558298 SREBF2 JASPAR yes 118228615
chr1 10558309 10558328 PAX5 JASPAR yes 26717541
chr1 10558309 10558328 PAX5 JASPAR yes 118228616
chr1 10558329 10558333 NFE TRANSFAC yes 26717542
chr1 10558329 10558333 NFE TRANSFAC yes 118228617
chr1 10558334 10558348 IRF7 JASPAR yes 26717543
chr1 10558334 10558348 IRF7 JASPAR yes 118228618
chr1 10558336 10558351 FOXP1 JASPAR yes 26717544
chr1 10558336 10558351 FOXP1 JASPAR yes 118228619
chr1 10558336 10558357 IRF1 JASPAR yes 26717545
chr1 10558336 10558357 IRF1 JASPAR yes 118228620
chr1 10558338 10558358 RREB1 JASPAR yes 26717546
chr1 10558338 10558358 RREB1 JASPAR yes 118228621
chr1 10558341 10558353 IRF1 JASPAR yes 26717547
chr1 10558341 10558353 IRF1 JASPAR yes 118228622
chr1 10558341 10558356 FOXP1 JASPAR yes 26717548
chr1 10558341 10558356 FOXP1 JASPAR yes 118228623
chr1 10558341 10558362 IRF1 JASPAR yes 26717549
chr1 10558341 10558362 IRF1 JASPAR yes 118228624
chr1 10558343 10558363 RREB1 JASPAR yes 26717550
chr1 10558343 10558363 RREB1 JASPAR yes 118228625
chr1 10558346 10558358 IRF1 JASPAR yes 26717551
chr1 10558346 10558358 IRF1 JASPAR yes 118228626
chr1 10558346 10558361 FOXP1 JASPAR yes 26717552
chr1 10558346 10558361 FOXP1 JASPAR yes 118228627
chr1 10558346 10558367 IRF1 JASPAR yes 26717553
chr1 10558346 10558367 IRF1 JASPAR yes 118228628
chr1 10558348 10558368 RREB1 JASPAR yes 26717554
chr1 10558348 10558368 RREB1 JASPAR yes 118228629
chr1 10558351 10558363 IRF1 JASPAR yes 26717555
chr1 10558351 10558363 IRF1 JASPAR yes 118228630
chr1 10558351 10558366 FOXP1 JASPAR yes 26717556
chr1 10558351 10558366 FOXP1 JASPAR yes 118228631
chr1 10558351 10558372 IRF1 JASPAR yes 26717557
chr1 10558351 10558372 IRF1 JASPAR yes 118228632
chr1 10558353 10558373 RREB1 JASPAR yes 26717558
chr1 10558353 10558373 RREB1 JASPAR yes 118228633
chr1 10558356 10558368 IRF1 JASPAR yes 26717559
chr1 10558356 10558368 IRF1 JASPAR yes 118228634
chr1 10558356 10558371 FOXP1 JASPAR yes 26717560
chr1 10558356 10558371 FOXP1 JASPAR yes 118228635
chr1 10558356 10558377 IRF1 JASPAR yes 26717561
chr1 10558356 10558377 IRF1 JASPAR yes 118228636
chr1 10558358 10558378 RREB1 JASPAR yes 26717562
chr1 10558358 10558378 RREB1 JASPAR yes 118228637
chr1 10558361 10558373 IRF1 JASPAR yes 26717563
chr1 10558361 10558373 IRF1 JASPAR yes 118228638
chr1 10558361 10558376 FOXP1 JASPAR yes 26717564
chr1 10558361 10558376 FOXP1 JASPAR yes 118228639
chr1 10558361 10558382 IRF1 JASPAR yes 26717565
chr1 10558361 10558382 IRF1 JASPAR yes 118228640
chr1 10558366 10558378 IRF1 JASPAR yes 26717566
chr1 10558366 10558378 IRF1 JASPAR yes 118228641
chr1 10558369 10558390 IRF1 JASPAR yes 26717567
chr1 10558369 10558390 IRF1 JASPAR yes 118228642
chr1 10558373 10558388 PRDM1 JASPAR yes 26717568
chr1 10558373 10558388 PRDM1 JASPAR yes 118228643
chr1 10558375 10558390 FOXP1 JASPAR yes 26717569
chr1 10558375 10558390 MEF2C JASPAR yes 26717570
chr1 10558375 10558390 FOXP1 JASPAR yes 118228644
chr1 10558375 10558390 MEF2C JASPAR yes 118228645
chr1 10558375 10558396 IRF1 JASPAR yes 26717571
chr1 10558375 10558396 IRF1 JASPAR yes 118228646
chr1 10558376 10558389 POU2F2 JASPAR yes 26717572
chr1 10558376 10558389 POU2F2 JASPAR yes 118228647
chr1 10558377 10558388 FOXC1 JASPAR yes 26717573
chr1 10558377 10558388 FOXC1 JASPAR yes 118228648
chr1 10558377 10558389 FOXC2 JASPAR yes 26717574
chr1 10558377 10558389 FOXC2 JASPAR yes 118228649
chr1 10558377 10558392 IRF9 JASPAR yes 26717575
chr1 10558377 10558392 IRF9 JASPAR yes 118228650
chr1 10558378 10558392 IRF7 JASPAR yes 26717576
chr1 10558378 10558392 IRF7 JASPAR yes 118228651
chr1 10558379 10558394 PRDM1 JASPAR yes 26717577
chr1 10558379 10558394 STAT2 JASPAR yes 26717578
chr1 10558379 10558394 PRDM1 JASPAR yes 118228652
chr1 10558379 10558394 STAT2 JASPAR yes 118228653
chr1 10558379 10558397 IRF2 JASPAR yes 26717579
chr1 10558379 10558397 IRF2 JASPAR yes 118228654
chr1 10558380 10558392 IRF1 JASPAR yes 26717580
chr1 10558380 10558392 IRF1 JASPAR yes 118228655
chr1 10558387 10558398 PROP1 JASPAR yes 26717581
chr1 10558387 10558398 PROP1 JASPAR yes 118228656
chr1 10558413 10558417 YY1 TRANSFAC yes 26717582
chr1 10558413 10558417 YY1 TRANSFAC yes 118228657
chr1 10558464 10558476 PBX1 JASPAR yes 26717583
chr1 10558464 10558476 PBX1 JASPAR yes 118228658
chr1 10558468 10558477 SRY JASPAR yes 26717584
chr1 10558468 10558477 SRY JASPAR yes 118228659
chr1 10558472 10558478 TCF4 TRANSFAC yes 26717585
chr1 10558472 10558478 TCF4 TRANSFAC yes 118228660
chr1 10558476 10558486 HOXB13 JASPAR yes 26717586
chr1 10558476 10558486 HOXB13 JASPAR yes 118228661
chr1 10558480 10558484 YY1 TRANSFAC yes 26717587
chr1 10558480 10558484 YY1 TRANSFAC yes 118228662
chr1 10558500 10558521 IRF1 JASPAR yes 26717588
chr1 10558500 10558521 IRF1 JASPAR yes 118228663
chr1 10558514 10558518 NFE TRANSFAC yes 26717589
chr1 10558514 10558518 NFE TRANSFAC yes 118228664
chr1 10558522 10558533 FOS JASPAR yes 26717590
chr1 10558522 10558533 FOS JASPAR yes 118228665
chr1 10558523 10558534 JUNB JASPAR yes 26717591
chr1 10558523 10558534 JUNB JASPAR yes 118228666
chr1 10558524 10558530 JUN TRANSFAC yes 26717592
chr1 10558524 10558530 JUN TRANSFAC yes 118228667
chr1 10558525 10558536 CDX2 JASPAR yes 26717593
chr1 10558525 10558536 CDX2 JASPAR yes 118228668
chr1 10558526 10558537 HOXA10 JASPAR yes 26717594
chr1 10558526 10558537 HOXC11 JASPAR yes 26717595
chr1 10558526 10558537 HOXC12 JASPAR yes 26717596
chr1 10558526 10558537 HOXD12 JASPAR yes 26717597
chr1 10558526 10558537 HOXA10 JASPAR yes 118228669
chr1 10558526 10558537 HOXC11 JASPAR yes 118228670
chr1 10558526 10558537 HOXC12 JASPAR yes 118228671
chr1 10558526 10558537 HOXD12 JASPAR yes 118228672
chr1 10558527 10558536 CDX1 JASPAR yes 26717598
chr1 10558527 10558536 CDX1 JASPAR yes 118228673
chr1 10558527 10558537 HOXA13 JASPAR yes 26717599
chr1 10558527 10558537 HOXC10 JASPAR yes 26717600
chr1 10558527 10558537 HOXD11 JASPAR yes 26717601
chr1 10558527 10558537 HOXA13 JASPAR yes 118228674
chr1 10558527 10558537 HOXC10 JASPAR yes 118228675
chr1 10558527 10558537 HOXD11 JASPAR yes 118228676
chr1 10558537 10558541 NFE TRANSFAC yes 26717602
chr1 10558537 10558541 NFE TRANSFAC yes 118228677
chr1 10558545 10558560 RUNX2 JASPAR yes 26717603
chr1 10558545 10558560 RUNX2 JASPAR yes 118228678
chr1 10558549 10558559 RUNX3 JASPAR yes 26717604
chr1 10558549 10558559 RUNX3 JASPAR yes 118228679
chr1 10558592 10558604 FOXI1 JASPAR yes 26717605
chr1 10558592 10558604 FOXI1 JASPAR yes 118228680
SNP sites on vista328[chr1:10558276-10558621]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10558337 rs371377667 TAAAACAAAACAAAACAAAAC T
FOXP1 IRF1 IRF7
72221
chr1 10558337 rs539042222 TAAAACAAAAC T
FOXP1 IRF1 IRF7
72222
chr1 10558337 rs551395151 TAAAACAAAACAAAACAAAAC T
FOXP1 IRF1 IRF7
72223
chr1 10558399 rs190485165 C T no 72224
chr1 10558494 rs140859543 A G no 72225
chr1 10558544 rs74994354 C T no 72226
Genes possibly regulated by vista328[chr1:10558276-10558621]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10458649 10480201 + PGD ENSG00000142657.16 10458649 0.73 0.99 135 373
chr1 10490159 10512210 + APITD1 ENSG00000175279.17 10490159 0.77 0.94 136 31883
chr1 10490159 10512210 + APITD1-CORT ENSG00000251503.3 10490159 0.86 0.88 137 31883
chr1 10509776 10511959 + CORT ENSG00000241563.2 10509776 0.82 0.99 138 51500
chr1 10516579 10532583 - DFFA ENSG00000160049.7 10532583 0.75 1.0 139 74307
chr1 10532345 10690815 + PEX14 ENSG00000142655.8 10532345 0.57 1.0 140 74069
Expression level of Genes
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miRNAs possibly regulated by vista328[chr1:10558276-10558621]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results