EnhancerDB
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  3. vista3306[chr1:151952807-151953143]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3306[chr1:151952807-151953143]
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Tissue distribution of vista3306
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Transcription factor that possibly regulate vista3306[chr1:151952807-151953143]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 151952078 151954189 POLR2A UCSC Txn Factor no Conserved 107830337
chr1 151953019 151953419 FOS UCSC Txn Factor no Conserved 107830347
chr1 151953056 151953400 STAT3 UCSC Txn Factor no Conserved 107830348
chr1 151952829 151952844 MEF2C JASPAR yes 32209638
chr1 151952829 151952844 MEF2C JASPAR yes 118369349
chr1 151952840 151952843 MYB TRANSFAC yes 32209639
chr1 151952840 151952843 MYB TRANSFAC yes 118369350
chr1 151952849 151952859 ZNF740 JASPAR yes 32209640
chr1 151952849 151952859 ZNF740 JASPAR yes 118369351
chr1 151952850 151952855 TFAP2A TRANSFAC yes 32209641
chr1 151952850 151952855 TFAP2A TRANSFAC yes 118369352
chr1 151952850 151952856 MZF1 JASPAR yes 32209642
chr1 151952850 151952856 MZF1 JASPAR yes 118369353
chr1 151952850 151952860 SP1 JASPAR yes 32209643
chr1 151952850 151952860 SP1 JASPAR yes 118369354
chr1 151952852 151952858 MAZ TRANSFAC yes 32209644
chr1 151952852 151952858 MAZ TRANSFAC yes 118369355
chr1 151952856 151952866 SP1 JASPAR yes 32209645
chr1 151952856 151952866 SP1 JASPAR yes 118369356
chr1 151952857 151952862 SP1 TRANSFAC yes 32209646
chr1 151952857 151952862 SP1 TRANSFAC yes 118369357
chr1 151952858 151952863 SP1 TRANSFAC yes 32209647
chr1 151952858 151952863 SP1 TRANSFAC yes 118369358
chr1 151952870 151952880 HOXD11 JASPAR yes 32209648
chr1 151952870 151952880 HOXD11 JASPAR yes 118369359
chr1 151952870 151952881 HOXC11 JASPAR yes 32209649
chr1 151952870 151952881 HOXC12 JASPAR yes 32209650
chr1 151952870 151952881 HOXC11 JASPAR yes 118369360
chr1 151952870 151952881 HOXC12 JASPAR yes 118369361
chr1 151952900 151952910 TEAD4 JASPAR yes 32209651
chr1 151952900 151952910 TEAD4 JASPAR yes 118369362
chr1 151952901 151952912 NFKB1 JASPAR yes 32209652
chr1 151952901 151952912 NFKB1 JASPAR yes 118369363
chr1 151952902 151952913 NFKB1 JASPAR yes 32209653
chr1 151952902 151952913 NFKB1 JASPAR yes 118369364
chr1 151952902 151952917 HSF1 JASPAR yes 32209654
chr1 151952902 151952917 HSF1 JASPAR yes 118369365
chr1 151952903 151952916 HSF1 JASPAR yes 32209655
chr1 151952903 151952916 HSF2 JASPAR yes 32209656
chr1 151952903 151952916 HSF4 JASPAR yes 32209657
chr1 151952903 151952916 HSF1 JASPAR yes 118369366
chr1 151952903 151952916 HSF2 JASPAR yes 118369367
chr1 151952903 151952916 HSF4 JASPAR yes 118369368
chr1 151952905 151952915 NFATC3 JASPAR yes 32209658
chr1 151952905 151952915 NFATC3 JASPAR yes 118369369
chr1 151952906 151952913 NFATC2 JASPAR yes 32209659
chr1 151952906 151952913 NFATC2 JASPAR yes 118369370
chr1 151952907 151952920 ZBTB18 JASPAR yes 32209660
chr1 151952907 151952920 ZBTB18 JASPAR yes 118369371
chr1 151952907 151952922 HSF1 JASPAR yes 32209661
chr1 151952907 151952922 HSF1 JASPAR yes 118369372
chr1 151952908 151952921 HSF1 JASPAR yes 32209662
chr1 151952908 151952921 HSF2 JASPAR yes 32209663
chr1 151952908 151952921 HSF4 JASPAR yes 32209664
chr1 151952908 151952921 HSF1 JASPAR yes 118369373
chr1 151952908 151952921 HSF2 JASPAR yes 118369374
chr1 151952908 151952921 HSF4 JASPAR yes 118369375
chr1 151952909 151952921 TAL1 JASPAR yes 32209665
chr1 151952909 151952921 TAL1 JASPAR yes 118369376
chr1 151952918 151952925 SPIB JASPAR yes 32209666
chr1 151952918 151952925 SPIB JASPAR yes 118369377
chr1 151952934 151952940 NFIC JASPAR yes 32209667
chr1 151952934 151952940 NFIC JASPAR yes 118369378
chr1 151952934 151952948 TLX1 JASPAR yes 32209668
chr1 151952934 151952948 TLX1 JASPAR yes 118369379
chr1 151952935 151952949 TLX1 JASPAR yes 32209669
chr1 151952935 151952949 TLX1 JASPAR yes 118369380
chr1 151952952 151952966 EBF1 JASPAR yes 32209670
chr1 151952952 151952966 EBF1 JASPAR yes 118369381
chr1 151952953 151952964 EBF1 JASPAR yes 32209671
chr1 151952953 151952964 EBF1 JASPAR yes 118369382
chr1 151952954 151952965 EBF1 JASPAR yes 32209672
chr1 151952954 151952965 EBF1 JASPAR yes 118369383
chr1 151952982 151952999 BCL6B JASPAR yes 32209673
chr1 151952982 151952999 BCL6B JASPAR yes 118369384
chr1 151952982 151953003 MAFG JASPAR yes 32209674
chr1 151952982 151953003 MAFG JASPAR yes 118369385
chr1 151952986 151952996 SMAD3 JASPAR yes 32209675
chr1 151952986 151952996 SMAD3 JASPAR yes 118369386
chr1 151952987 151953005 MAFF JASPAR yes 32209676
chr1 151952987 151953005 MAFF JASPAR yes 118369387
chr1 151952992 151953002 MYF6 JASPAR yes 32209677
chr1 151952992 151953002 MYF6 JASPAR yes 118369388
chr1 151953008 151953012 ESR1 TRANSFAC yes 32209678
chr1 151953008 151953012 ESR1 TRANSFAC yes 118369389
chr1 151953031 151953046 FOXA1 JASPAR yes 32209679
chr1 151953031 151953046 FOXA1 JASPAR yes 118369390
chr1 151953032 151953038 TCF4 TRANSFAC yes 32209680
chr1 151953032 151953038 TCF4 TRANSFAC yes 118369391
chr1 151953033 151953045 FOXC2 JASPAR yes 32209681
chr1 151953033 151953045 FOXC2 JASPAR yes 118369392
chr1 151953035 151953045 NFIA JASPAR yes 32209682
chr1 151953035 151953045 NFIA JASPAR yes 118369393
chr1 151953036 151953045 NFIX JASPAR yes 32209683
chr1 151953036 151953045 NFIX JASPAR yes 118369394
chr1 151953037 151953043 NFIC JASPAR yes 32209684
chr1 151953037 151953043 NFIC JASPAR yes 118369395
chr1 151953042 151953048 SOX10 JASPAR yes 32209685
chr1 151953042 151953048 SOX10 JASPAR yes 118369396
chr1 151953058 151953063 H4TF1 TRANSFAC yes 32209686
chr1 151953058 151953063 H4TF1 TRANSFAC yes 118369397
chr1 151953064 151953075 CDX2 JASPAR yes 32209687
chr1 151953064 151953075 CDX2 JASPAR yes 118369398
chr1 151953064 151953079 MEF2C JASPAR yes 32209688
chr1 151953064 151953079 MEF2C JASPAR yes 118369399
chr1 151953065 151953076 HOXA10 JASPAR yes 32209689
chr1 151953065 151953076 HOXA10 JASPAR yes 118369400
chr1 151953065 151953080 MEF2A JASPAR yes 32209690
chr1 151953065 151953080 MEF2A JASPAR yes 118369401
chr1 151953066 151953075 CDX1 JASPAR yes 32209691
chr1 151953066 151953075 CDX1 JASPAR yes 118369402
chr1 151953066 151953078 MEF2B JASPAR yes 32209692
chr1 151953066 151953078 MEF2B JASPAR yes 118369403
chr1 151953074 151953095 IRF1 JASPAR yes 32209693
chr1 151953074 151953095 IRF1 JASPAR yes 118369404
chr1 151953077 151953081 YY1 TRANSFAC yes 32209694
chr1 151953077 151953081 YY1 TRANSFAC yes 118369405
chr1 151953078 151953090 IRF1 JASPAR yes 32209695
chr1 151953078 151953090 IRF1 JASPAR yes 118369406
chr1 151953078 151953092 IRF7 JASPAR yes 32209696
chr1 151953078 151953092 IRF7 JASPAR yes 118369407
chr1 151953083 151953087 YY1 TRANSFAC yes 32209697
chr1 151953083 151953087 YY1 TRANSFAC yes 118369408
chr1 151953130 151953138 EHF JASPAR yes 32209698
chr1 151953130 151953138 EHF JASPAR yes 118369409
chr1 151953143 151953146 MYB TRANSFAC yes 32209699
chr1 151953143 151953146 MYB TRANSFAC yes 118369410
SNP sites on vista3306[chr1:151952807-151953143]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 151952879 rs146666150 A T
HOXC11 HOXC12 HOXD11 POLR2A
628429
chr1 151952885 rs2999528 C T
POLR2A
628430
chr1 151953046 rs2932591 A G
FOS FOXA1 POLR2A SOX10
628431
Genes possibly regulated by vista3306[chr1:151952807-151953143]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 151846060 151882284 - THEM4 ENSG00000159445.8 151882284 0.75 0.99 1215 29477
chr1 151955391 151966866 - S100A10 ENSG00000197747.4 151966866 0.9 0.99 1216 86277
chr1 152004982 152020383 - S100A11 ENSG00000163191.5 152020383 0.92 0.99 1217 32760
Expression level of Genes
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miRNAs possibly regulated by vista3306[chr1:151952807-151953143]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results