EnhancerDB
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  3. rs2999528[chr1:151952885]
Enhancers that have rs2999528[chr1:151952885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151932405 151955339 enh12260
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Kidney Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 151952807 151953143 vista3306
VISTA
Transcript factors that have rs2999528[chr1:151952885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151952078 151954189 POLR2A UCSC Txn Factor no Conserved 107830337
chr1 151952357 151954061 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107830338
chr1 151952738 151953254 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338865
chr1 151952738 151953254 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107830339
chr1 151952828 151953424 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107830340
chr1 151952830 151953455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338866
chr1 151952830 151953455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107830341
chr1 151952844 151953214 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338867
chr1 151952844 151953214 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107830342
Genes associated with rs2999528[chr1:151952885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 151955391 151966866 - S100A10 ENSG00000197747.4 151966866 2506 Stomach 0.0465995 1216