EnhancerDB
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  3. vista3397[chr1:154783587-154784004]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3397[chr1:154783587-154784004]
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Tissue distribution of vista3397
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Transcription factor that possibly regulate vista3397[chr1:154783587-154784004]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154783587 154783602 SCRT1 JASPAR yes 32313183
chr1 154783587 154783602 SCRT1 JASPAR yes 118373954
chr1 154783588 154783598 FIGLA JASPAR yes 32313184
chr1 154783588 154783598 TCF3 JASPAR yes 32313185
chr1 154783588 154783598 FIGLA JASPAR yes 118373955
chr1 154783588 154783598 TCF3 JASPAR yes 118373956
chr1 154783589 154783598 SNAI2 JASPAR yes 32313186
chr1 154783589 154783598 SNAI2 JASPAR yes 118373957
chr1 154783589 154783602 SCRT2 JASPAR yes 32313187
chr1 154783589 154783602 SCRT2 JASPAR yes 118373958
chr1 154783590 154783595 USF2 TRANSFAC yes 32313188
chr1 154783590 154783595 USF2 TRANSFAC yes 118373959
chr1 154783596 154783606 REL JASPAR yes 32313189
chr1 154783596 154783606 REL JASPAR yes 118373960
chr1 154783609 154783623 SPI1 JASPAR yes 32313190
chr1 154783609 154783623 SPI1 JASPAR yes 118373961
chr1 154783613 154783619 MZF1 JASPAR yes 32313191
chr1 154783613 154783619 MZF1 JASPAR yes 118373962
chr1 154783616 154783620 H1TF2 TRANSFAC yes 32313192
chr1 154783616 154783620 NFE TRANSFAC yes 32313193
chr1 154783616 154783620 SRF TRANSFAC yes 32313194
chr1 154783616 154783620 H1TF2 TRANSFAC yes 118373963
chr1 154783616 154783620 NFE TRANSFAC yes 118373964
chr1 154783616 154783620 SRF TRANSFAC yes 118373965
chr1 154783632 154783653 REST JASPAR yes 32313195
chr1 154783632 154783653 REST JASPAR yes 118373966
chr1 154783633 154783652 REST JASPAR yes 32313196
chr1 154783633 154783652 REST JASPAR yes 118373967
chr1 154783642 154783654 HES7 JASPAR yes 32313197
chr1 154783642 154783654 HES7 JASPAR yes 118373968
chr1 154783643 154783653 BHLHE41 JASPAR yes 32313198
chr1 154783643 154783653 BHLHE41 JASPAR yes 118373969
chr1 154783649 154783654 ATF1 TRANSFAC yes 32313199
chr1 154783649 154783654 ATF1 TRANSFAC yes 118373970
chr1 154783655 154783673 RARA JASPAR yes 32313200
chr1 154783655 154783673 RARA JASPAR yes 118373971
chr1 154783667 154783682 NR2C2 JASPAR yes 32313201
chr1 154783667 154783682 NR2C2 JASPAR yes 118373972
chr1 154783668 154783682 RXRB JASPAR yes 32313202
chr1 154783668 154783682 RXRG JASPAR yes 32313203
chr1 154783668 154783682 RXRB JASPAR yes 118373973
chr1 154783668 154783682 RXRG JASPAR yes 118373974
chr1 154783694 154783700 SOX10 JASPAR yes 32313204
chr1 154783694 154783700 SOX10 JASPAR yes 118373975
chr1 154783735 154783750 RUNX2 JASPAR yes 32313205
chr1 154783735 154783750 RUNX2 JASPAR yes 118373976
chr1 154783763 154783778 RUNX2 JASPAR yes 32313206
chr1 154783763 154783778 RUNX2 JASPAR yes 118373977
chr1 154783779 154783791 TGIF1 JASPAR yes 32313207
chr1 154783779 154783791 TGIF2 JASPAR yes 32313208
chr1 154783779 154783791 TGIF1 JASPAR yes 118373978
chr1 154783779 154783791 TGIF2 JASPAR yes 118373979
chr1 154783831 154783836 GATA2 JASPAR yes 32313209
chr1 154783831 154783836 GATA2 JASPAR yes 118373980
chr1 154783833 154783845 FOXI1 JASPAR yes 32313210
chr1 154783833 154783845 FOXI1 JASPAR yes 118373981
chr1 154783839 154783850 FOXB1 JASPAR yes 32313211
chr1 154783839 154783850 FOXB1 JASPAR yes 118373982
chr1 154783840 154783848 FOXL1 JASPAR yes 32313212
chr1 154783840 154783848 FOXL1 JASPAR yes 118373983
chr1 154783841 154783851 MEF2A JASPAR yes 32313213
chr1 154783841 154783851 MEF2A JASPAR yes 118373984
chr1 154783842 154783850 FOXL1 JASPAR yes 32313214
chr1 154783842 154783850 FOXL1 JASPAR yes 118373985
chr1 154783846 154783850 TEAD2 TRANSFAC yes 32313215
chr1 154783846 154783850 TEAD2 TRANSFAC yes 118373986
chr1 154783851 154783862 PROP1 JASPAR yes 32313216
chr1 154783851 154783862 PROP1 JASPAR yes 118373987
chr1 154783852 154783864 MEF2A JASPAR yes 32313217
chr1 154783852 154783864 MEF2B JASPAR yes 32313218
chr1 154783852 154783864 MEF2D JASPAR yes 32313219
chr1 154783852 154783864 MEF2A JASPAR yes 118373988
chr1 154783852 154783864 MEF2B JASPAR yes 118373989
chr1 154783852 154783864 MEF2D JASPAR yes 118373990
chr1 154783853 154783863 MEF2A JASPAR yes 32313220
chr1 154783853 154783863 MEF2A JASPAR yes 118373991
chr1 154783854 154783858 TEAD2 TRANSFAC yes 32313221
chr1 154783854 154783858 TEAD2 TRANSFAC yes 118373992
chr1 154783854 154783864 ALX3 JASPAR yes 32313222
chr1 154783854 154783864 MEOX2 JASPAR yes 32313223
chr1 154783854 154783864 MNX1 JASPAR yes 32313224
chr1 154783854 154783864 ALX3 JASPAR yes 118373993
chr1 154783854 154783864 MEOX2 JASPAR yes 118373994
chr1 154783854 154783864 MNX1 JASPAR yes 118373995
chr1 154783855 154783863 LBX1 JASPAR yes 32313225
chr1 154783855 154783863 PDX1 JASPAR yes 32313226
chr1 154783855 154783863 VAX1 JASPAR yes 32313227
chr1 154783855 154783863 VAX2 JASPAR yes 32313228
chr1 154783855 154783863 VSX1 JASPAR yes 32313229
chr1 154783855 154783863 VSX2 JASPAR yes 32313230
chr1 154783855 154783863 LBX1 JASPAR yes 118373996
chr1 154783855 154783863 PDX1 JASPAR yes 118373997
chr1 154783855 154783863 VAX1 JASPAR yes 118373998
chr1 154783855 154783863 VAX2 JASPAR yes 118373999
chr1 154783855 154783863 VSX1 JASPAR yes 118374000
chr1 154783855 154783863 VSX2 JASPAR yes 118374001
chr1 154783862 154783872 ESX1 JASPAR yes 32313231
chr1 154783862 154783872 RAX JASPAR yes 32313232
chr1 154783862 154783872 ESX1 JASPAR yes 118374002
chr1 154783862 154783872 RAX JASPAR yes 118374003
chr1 154783863 154783871 BARX1 JASPAR yes 32313233
chr1 154783863 154783871 BARX1 JASPAR yes 118374004
chr1 154783863 154783875 MYBL1 JASPAR yes 32313234
chr1 154783863 154783875 MYBL1 JASPAR yes 118374005
chr1 154783868 154783871 MYB TRANSFAC yes 32313235
chr1 154783868 154783871 MYB TRANSFAC yes 118374006
chr1 154783870 154783875 ATF1 TRANSFAC yes 32313236
chr1 154783870 154783875 ATF1 TRANSFAC yes 118374007
chr1 154783885 154783892 NKX3-1 JASPAR yes 32313237
chr1 154783885 154783892 NKX3-1 JASPAR yes 118374008
chr1 154783901 154783914 POU3F3 JASPAR yes 32313238
chr1 154783901 154783914 POU3F3 JASPAR yes 118374009
chr1 154783902 154783914 POU3F1 JASPAR yes 32313239
chr1 154783902 154783914 POU3F2 JASPAR yes 32313240
chr1 154783902 154783914 POU3F1 JASPAR yes 118374010
chr1 154783902 154783914 POU3F2 JASPAR yes 118374011
chr1 154783918 154783930 POU2F1 JASPAR yes 32313241
chr1 154783918 154783930 POU2F1 JASPAR yes 118374012
chr1 154783918 154783931 POU3F3 JASPAR yes 32313242
chr1 154783918 154783931 POU3F3 JASPAR yes 118374013
chr1 154783919 154783931 POU3F1 JASPAR yes 32313243
chr1 154783919 154783931 POU3F2 JASPAR yes 32313244
chr1 154783919 154783931 POU3F1 JASPAR yes 118374014
chr1 154783919 154783931 POU3F2 JASPAR yes 118374015
chr1 154783919 154783932 POU2F2 JASPAR yes 32313245
chr1 154783919 154783932 POU2F2 JASPAR yes 118374016
chr1 154783920 154783928 FOXL1 JASPAR yes 32313246
chr1 154783920 154783928 FOXL1 JASPAR yes 118374017
chr1 154783920 154783929 POU3F4 JASPAR yes 32313247
chr1 154783920 154783929 POU3F4 JASPAR yes 118374018
chr1 154783926 154783930 YY1 TRANSFAC yes 32313248
chr1 154783926 154783930 YY1 TRANSFAC yes 118374019
chr1 154783930 154783941 RUNX1 JASPAR yes 32313249
chr1 154783930 154783941 RUNX1 JASPAR yes 118374020
chr1 154783959 154783979 TP63 JASPAR yes 32313250
chr1 154783959 154783979 TP63 JASPAR yes 118374021
chr1 154783960 154783978 TP53 JASPAR yes 32313251
chr1 154783960 154783978 TP63 JASPAR yes 32313252
chr1 154783960 154783978 TP73 JASPAR yes 32313253
chr1 154783960 154783978 TP53 JASPAR yes 118374022
chr1 154783960 154783978 TP63 JASPAR yes 118374023
chr1 154783960 154783978 TP73 JASPAR yes 118374024
chr1 154783961 154783976 TP53 JASPAR yes 32313254
chr1 154783961 154783976 TP53 JASPAR yes 118374025
SNP sites on vista3397[chr1:154783587-154784004]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154783643 rs115470763 C A,T
BHLHE41 HES7 REST
640855
chr1 154783756 rs6700814 A G no 640856
chr1 154783773 rs6688473 C T
RUNX2
640857
chr1 154783816 rs56366285 A T no 640858
Genes possibly regulated by vista3397[chr1:154783587-154784004]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154669931 154842756 - KCNN3 ENSG00000143603.14 154842756 0.92 0.9 1307 41248
Expression level of Genes
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miRNAs possibly regulated by vista3397[chr1:154783587-154784004]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results